Sphingobium chlorophenolicum: Sphch_2228
Help
Entry
Sphch_2228 CDS
T01522
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03030
DNA replication
sch03430
Mismatch repair
sch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sphch_2228
03430 Mismatch repair
Sphch_2228
03440 Homologous recombination
Sphch_2228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sch03032
]
Sphch_2228
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_2228
Enzymes [BR:
sch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sphch_2228
DNA replication proteins [BR:
sch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sphch_2228
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sphch_2228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEG49889
UniProt:
F6EWV1
LinkDB
All DBs
Position
1:2387595..2388287
Genome browser
AA seq
230 aa
AA seq
DB search
MREIIFDTETTGFDPASGDRLVEIGCIELFNRVPTGRTFHAYYNPQRSMPAAAEAVHGLS
DGFLRDKPLFGHGVQELLAFLEDSHLVAHNARFDFGFLNHELKLCGLPEVSMDRMIDTVA
IARQIHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAQLYIELTGGRQIGLGLAQEE
EKLIVNMELAAKAAVRPVRPARVFAASAEELERHAAFVATLEKPLWLEEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagattattttcgacaccgaaacgaccggcttcgaccctgcctcaggcgatcgc
ctggtcgaaatcggatgtattgaactcttcaaccgggtgcccacgggccgcactttccac
gcttattataatccgcagcggtccatgcccgctgccgcggaggccgtgcacggcctgtcg
gacggattcctgagggacaagccgctgttcgggcatggcgtgcaggaattgctcgccttt
ctggaggacagccatctggtcgcgcataatgcgcgcttcgacttcggcttcctcaatcac
gaactgaaactgtgcggcctgcccgaagtgtcgatggaccggatgatcgacaccgtcgcc
atcgcccggcagattcaccccggcgccaagcatagcctggacgcgctctgcacccgctac
ggcatcgaccgcagccatcgcatcaagcatggcgcgctgctcgacgccgaattgctggcc
cagctttatattgaactgaccggcggccgtcagatcggccttggtcttgcacaggaggaa
gagaaactcattgtaaacatggaacttgcggcgaaggccgcggttcgccctgttcgtccc
gcgcgcgttttcgcggccagcgcggaagagctggagaggcatgcagcgttcgtcgcgacg
ctggaaaagccgctctggctggaggaggcctga
DBGET
integrated database retrieval system
