Sphingobium chlorophenolicum: Sphch_2254
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Entry
Sphch_2254 CDS
T01522
Name
(GenBank) tRNA modification GTPase mnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sch03016
]
Sphch_2254
Transfer RNA biogenesis [BR:
sch03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Sphch_2254
Prokaryotic type
Methyltransferases
Sphch_2254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
ABC_tran
AAA_28
AAA_25
AAA_18
AAA_24
Arf
Motif
Other DBs
NCBI-ProteinID:
AEG49915
UniProt:
F6EX94
LinkDB
All DBs
Position
1:2413329..2414609
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AA seq
426 aa
AA seq
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MTDSIFALSSGAPPAGIGVIRISGPSAGPALIALAGALPPPRHARLSSLTDPRDGALLDR
ALILWFPGPSTVTGEDLAELHCHGGRAVIAAIEEALSTLPGLRRAEAGEFTRRAFANGRM
DLNAVEGLSDLLAAETQQQRRAALLMAEGHFSRRVEDWRRTLLDLSAMTEAALDFSDEDD
VPDEGIEARIGQGIQTLADDVEAILAAPSAERLRDGVRVVLAGPPNAGKSTLLNRLVGRE
AAIVSDIAGTTRDRIEVPAALGGAAFLFMDTAGLRDETSDAIEAIGMERARGALDAADII
LWLGPADEAPRADAILLAPQCDRRTDSRPGLRLSAITGEGMPELVALLLDRAARLLPGEG
DYALHRRQRDAASLLHTHLASAAVSDDLLIVAELLRQARNAIDQLTGRASTEDMLDHLFS
GFCIGK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatagcatcttcgcgctgtcgagcggcgcgccgcccgccgggatcggcgtgatc
cgcatcagcggcccatcggcgggtccggcccttatcgcgctcgcaggcgctttgccgccg
ccgcgccacgcccgcctgtcctccctgaccgacccgcgagacggcgcattgctggatcgc
gccctgatcctgtggtttcccggcccctccacagtgacgggcgaggatctggccgaattg
cactgccatggcgggcgggcggtgatcgccgccatagaagaggccttgtccacgctcccc
ggcctacgccgcgccgaagcaggggaattcacccgtcgcgccttcgccaatggccgcatg
gacctgaacgcggtggagggattgtccgacctcctcgccgccgaaacccagcaacagcgc
cgcgccgcgctgctgatggcggagggccatttctcccgccgggtggaggactggcgccga
accttgctcgacctgtcggccatgaccgaggccgcgctggatttctccgacgaggacgac
gtgcccgacgaaggaatagaggcgcgcatcggccaaggcatccagaccctggccgatgat
gtcgaagccatccttgcagccccatcggccgagcggctgcgcgacggcgtccgggtggtg
ctggccggcccgcccaatgcgggcaaatccactctgctcaaccgactggtcggccgcgaa
gccgccatcgtctccgacatcgcggggacgaccagggaccggatagaggtgcccgcggca
ctcggcggcgcggccttcctgttcatggacacggcgggcctgcgcgacgaaaccagcgat
gccatcgaagcgatcggcatggagcgggcgaggggggcgctggatgccgccgacatcatc
ctctggctgggtccggcggacgaagcgccccgcgccgacgccatcctgcttgccccgcaa
tgcgaccgaaggacagacagccgtcccggtctgcgcctgtccgccatcacgggggagggg
atgccggaattggtcgccctcctgctcgaccgggcggcccgccttcttcccggcgaaggc
gactatgccctgcaccggcggcaacgcgatgccgcaagccttttgcacacgcatctggca
tcggccgctgtgagcgacgacctgctgatcgtggcggaattattgcgccaggcccgcaac
gccatcgatcaactcacgggccgggcaagcaccgaagacatgctcgaccatcttttctcc
ggtttttgcatcggcaaatag
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