KEGG   Sphingobium chlorophenolicum: Sphch_2267
Entry
Sphch_2267        CDS       T01522                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sch  Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:sch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sch03400]
    Sphch_2267
Enzymes [BR:sch01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sphch_2267
    5.6.2.6  RNA 3'-5' helicase
     Sphch_2267
DNA repair and recombination proteins [BR:sch03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Sphch_2267
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: AEG49928
UniProt: F6EXA7
LinkDB
Position
1:2428513..2430969
AA seq 818 aa
MNGNDLYALPSYTLPMNQRLPEPLEQWFTSRGWTPRRHQLDMLTAARSGDHALLVAPTGA
GKTLAGFLPTLTDLIENPGEGLHTLYISPLKALAVDVRRNLLTPIEEMDLPIRVETRTGD
TPSDRKARQRARPPQILLTTPESLSLLLSYPDSFLMFAGLKTVIVDEVHAFATQKRGDLL
NLSLSRLQAINPGLRRVALSATVADVDAYRAWLAPDGDIGAVTPVMGEQGADPHVAILIP
DGRIPWSGHSGKYAAKQVMEEIERRATTLVFCNTRGLAELIFQSLWSVNEANLPIAIHHG
SLSIEARRKVEAAMAAGRLRALVATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIGRAN
HRLDTPSEAILIPGNRFEYLEARAALDAVEAGERDTDDFRPGSLDVLAQHVMGLACAAPF
REESLLAEIRSATPYSALTEEAFANVLHFIEGGGYALRAYDRFKRLTHDPDGTWRVSHPR
FVQQHRLNAGIIVDQPVLDVRFANGRKLGTVEEGFAATLRPGDSFFFSGMALEAVRMDTT
DLVVRATSKQARIPTWGGTRMAMSTRLADRVRHFLAEPDQWSRFPDDVRDWLEVQKYRSA
LPEPGQLLIETFPHEGRYYLVCYSFEGWNAHQSLGMLLTRRMDAQGLMPMGFVSNDYALA
VYGLKPVTDPASLFSADILDHEFIQWVEQSSLLKRAFRDVAVISGLIERQHPGKRKTGRQ
VTFSTDLIYDVLRKYQPDHLLLKAAWADARARMTDVGRLGDLIDRASSTMLHIDLDRVSP
LAVPVLILIGREQVAQHAVEDALLIEAEALVAEAMRTD
NT seq 2457 nt   +upstreamnt  +downstreamnt
ttgaatgggaatgacctttacgcgctgccgtcctacacccttcccatgaaccaacgccta
cccgaacccctggagcaatggttcacgtcccgcggctggacgccccgccgccatcagctc
gatatgctgaccgccgcccgttccggcgatcacgcgctgctggtcgctcccaccggcgcg
ggcaagacgctcgccggtttcctgccgaccctcaccgacctgatcgaaaatcccggcgaa
ggcctccacaccctctatatctcgccgctcaaggcgcttgccgtcgacgtccgccgcaat
ctcctcacccccatcgaggaaatggacctgccgatccgcgtcgaaacccgcaccggcgac
accccgtccgaccgcaaggcccgccagcgcgcccgcccgccgcaaatcctgctcaccacg
cccgaatccctctcccttctcctgagttaccccgacagcttcctgatgttcgcagggttg
aagaccgtcatcgtcgacgaagtccacgccttcgccacccagaagcgcggcgacctgctc
aacctctcgctttcccggttgcaggcgatcaaccccggccttcgccgcgtcgcgctgtca
gccacggtcgcggatgtcgacgcctatcgcgcctggctggccccggacggggacatcggt
gccgtcacccctgtgatgggcgagcagggcgccgatccccatgtcgccatcctgatcccc
gacggccgcatcccctggtccggccacagcggcaaatatgccgcgaaacaggtgatggaa
gaaatcgagcgccgcgccaccacgctggtcttctgcaacacgcgggggctggcggaactc
atcttccagtccctctggtcggtgaatgaggcgaacctgcccatcgccatccaccatggc
agcctgtcgatagaggcgcggcgcaaggtcgaagcggcgatggcggcgggcaggctccgc
gccctggtcgccaccgcctcgctcgacctcggcgtcgactggggcaatgtcgactgcgtg
atccagatgggcgcgcccaagggcagttcccgcctgctccagcgtatcggacgcgccaac
caccggctcgacacgcctagcgaggcgatcctcatccccggcaaccgcttcgaatatctg
gaagcccgtgccgcgctggacgcggtggaggcaggcgagcgcgacacggacgatttccgc
cccggcagcctcgacgtcctcgcccagcatgtcatgggcctggcctgcgccgcgcccttc
cgcgaagagtcattgctggccgaaatccgctccgccacgccctatagcgcgctgacggag
gaagccttcgccaacgtcctccacttcatcgagggcggcggctatgccctgcgcgcctat
gaccggttcaagcggctgacccacgatcctgacggaacatggcgcgtctcccacccccgc
ttcgtccagcagcaccgcctgaacgcgggcatcatcgtcgaccagccagtgctggacgtc
cgcttcgccaacggccgcaaattgggcacggtggaggaggggttcgcggccacgctgcgg
cccggcgacagcttcttcttctccggcatggcgctggaggcggtgcggatggacacgacc
gatctcgtcgtccgcgccacgtcgaaacaggcgcgcatccccacttggggcggcacgcgc
atggcgatgtcgacccgtctcgccgaccgggtccgccatttcctggccgaacccgatcag
tggagccgtttcccggacgatgtccgcgactggctggaggtgcagaaatatcgatccgcc
ctgcccgagccggggcaactgctgatcgagacctttccccatgagggccgctactatctc
gtctgctacagtttcgaaggatggaacgcgcaccagtcgctcggcatgctgctgacccgc
cgcatggacgcgcagggattgatgccgatgggcttcgtctccaacgactatgcgctcgca
gtctacggcctgaagcccgtaaccgatccggcaagcctcttttccgccgacatactcgac
catgaattcatccagtgggtcgaacagtcgagcctgctcaaacgcgcctttcgcgacgtg
gcggtgatctccggcctgatcgagcgccagcatcccggcaagcgcaagaccgggcggcag
gtgacattctcgaccgacctcatctacgacgtgctgcgcaaatatcagccggatcatctg
ctgctgaaggccgcctgggccgacgcccgcgcccgaatgaccgatgttggccggttgggc
gacctgatcgaccgggcgtcgtcaacgatgctgcacatcgatcttgaccgggtaagcccg
ctggcggttccggtcctgatcctcatcggccgcgaacaggtcgcccagcatgcggtggag
gacgcgctgctgatcgaagccgaagccctggtggcggaagcgatgcggacggattga

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