Sphingobium chlorophenolicum: Sphch_2415
Help
Entry
Sphch_2415 CDS
T01522
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_2415
Enzymes [BR:
sch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sphch_2415
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Sphch_2415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_dom4_arc
Motif
Other DBs
NCBI-ProteinID:
AEG50075
UniProt:
F6EYC2
LinkDB
All DBs
Position
1:complement(2572605..2575484)
Genome browser
AA seq
959 aa
AA seq
DB search
MKSALPLDHGLSAHLLNNALLMPRQAGEPSITDAQYDALAAGVARGENMLVSAPTSTGKT
LIGWWGVNAALAAGHRVVYLVSYRALAHQKFEEAQRLFLEAVLQGDRSSIVCATGDSVED
ASGRKTSAPLSARILIATYEKFLGCLSTGGPPRDLTDICFVCDEIQLIGEKARGQNVELL
LTLLKRSRWGQFIGLSAVLSESDAVALADWLELKLVRNPTREKTLTIECRAPDKTVCVTS
APARDPNWSEIPAPRQQQLSPLGIITEMAANAARRPVIAFCMKVDETLSLAGQIAAARPA
TRHVEVPAGLDLDETLLGFLRKGVAFHNAELSEEERLFVETRLANGEVDIVFATTTLAAG
VNFPLGSAVFSAWQRWNRDRRRYEPISRAEFQNMAGRVGRMGQAGDGRVVLSANGVGELH
AATRLMDLAGQDELGSGITPEDFGPLVLQILAGKLCNRRDEAFKLLASTLSAAREISRNT
AGVAHWRPSLDAQVNRLLTLGCVIETGQLLTVTALGEAVARSGLKPETAIYFINNLARFG
SALSNLLPSVNGGGNEDDLAFVLAHAALASPEYGLEGGRPTRVIHWRVTEPNLVSNPLAR
RLEPLLFAQPWMGNVGAANGAMLLADWFSGQPRQQIEDRVGSVRLGTVQTIGRDVAWILT
GIAEIVSTITSPSLAEESKPEPIRDPIASQAVRRLARVIRRQAARISAGLPGDILWATSL
DLQDRPRRLSRPQLLALRAKGLVRSIDLMDGAAPADTARREALDAVTNPRLANLVRDAAR
RWKLDEREYCKRVHLKRAAPIGGAEIIEALYDTRGDAFEAAFASLLDFLAIPYQRLDGPG
KVGYPDFLVSIESFPGIVVELKTKVADNDVVPFNAATEVLSASELIGLRDHPCVTLCNPG
VEPSVPRLIESCGRLCVLEACDLAEAALRLREGVLSRDAFYNWLTTPGIALREDLPHLR
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggcgctgccgttagaccatgggttgagcgcccaccttctgaacaatgcatta
ctgatgcctcggcaagcaggcgagccgtccatcacagacgcacagtatgacgctttggct
gctggtgttgcacgcggcgaaaacatgctggtcagcgcaccgacgtcaaccgggaaaacc
ctcatcggatggtggggggtgaatgctgcactcgctgcaggtcatcgcgtagtctatctc
gtatcctaccgcgcactagcgcatcagaagtttgaggaggcgcagcgcttatttcttgag
gccgtgcttcaaggggatcgatcctcgatcgtctgcgcgactggcgacagtgttgaagat
gcttcgggtcgcaagacgagcgcgcctttgtctgcacgcatattgatcgcgacctatgag
aagtttttaggatgcctctcaactggcgggcctcccagagatctcactgatatctgcttc
gtttgtgatgaaattcagcttatcggagaaaaggctcgtgggcagaacgtcgagctgttg
ctcacactgcttaagcgctcgaggtggggacagttcattggactctcggcagtattgtcg
gaatccgatgctgttgcgctcgccgactggctcgagcttaaacttgttcgcaatcccact
agggaaaagacgcttactattgaatgccgtgcaccagataagactgtatgcgtgacatcg
gcacccgcgcgcgatccgaattggagcgagataccggcgccccgccagcagcaactatct
ccacttggaatcatcacggagatggcggctaatgcggcgcggcgacccgtgatcgctttc
tgcatgaaggttgacgagacgcttagcttagcgggccaaatagcggctgcacggcctgcc
actcggcatgtcgaagttcccgcagggctagaccttgatgaaacgttgcttggctttctc
aggaagggggtcgcgtttcacaatgccgaactgagcgaagaggagcgcctttttgtagaa
actcgtctcgcgaatggtgaggtagacatcgtattcgccacaacgacccttgccgcaggt
gtgaacttcccgctgggtagtgcggttttttcggcgtggcagcgatggaaccgtgatcgc
cgacgctatgaaccgataagccgtgctgagttccaaaacatggctgggcgcgtaggccgc
atgggccaagctggcgatggtcgcgttgtcttaagtgcgaatggggttggtgagcttcac
gcagcaacgcgtcttatggatctggcaggccaggacgaactcggcagcggcatcacgcca
gaggattttgggcctctggtgctccaaattcttgcaggcaaactctgcaatcgccgcgac
gaagcattcaaattactagcttcgacgctcagtgcagcacgtgagatttctcggaatact
gctggtgttgcgcattggcggcctagtttggatgcgcaggtcaatcggctactcacattg
ggatgtgtaatcgaaactgggcagctcttgacggttacggcactcggcgaggctgtggcg
aggagtggactcaaaccggaaacggctatttatttcatcaacaaccttgcccgctttgga
tcagcattgagtaatctgctgccgtcagtcaacggaggaggcaatgaggacgatctcgcc
ttcgtcctggcgcatgcggcgctagcctctccggagtacggcctggaaggaggacgcccg
actcgagtgattcactggcgcgtcaccgagcccaatcttgtctcaaatccccttgctcgt
cgattggagccgctacttttcgcccaaccgtggatgggtaatgtcggtgccgctaacggt
gctatgttgttggccgactggttctccggtcagccacggcagcagatcgaagaccgcgta
ggctccgttcgccttggcacggtccagaccatcggacgagacgttgcctggattctaaca
ggcattgcagaaatcgtcagtacaatcacatcgccctcgctagccgaagagagcaagccg
gagccaatacgagatcctatcgccagtcaggcggtacggcgactggcgcgtgtgatccgg
cgtcaggctgcacggattagtgccggtctccctggcgatatcctttgggcaacctccctc
gaccttcaagatcgaccgagacgattgtcacgtccgcaattgctagctttgcgggcaaaa
ggacttgttcgctccattgacttaatggatggtgcggcaccagccgacaccgctcggcgt
gaagcgcttgacgccgtcacaaatccacggctcgcaaacctggttcgggatgcggcgcgt
cgctggaagttggatgagcgggaatattgtaagcgtgtacacctcaagcgcgcagcaccg
atcggcggggcggaaattattgaggctctttatgatacgcgcggtgatgccttcgaagcc
gcttttgcaagcctgctggactttctagccatcccatatcaacgtctcgatggaccaggg
aaggttggttatccggattttcttgtctctatcgagagctttcccgggatcgtcgttgaa
cttaaaaccaaggtcgctgacaacgacgttgtccctttcaacgccgcaactgaggttctc
agcgcttcggaacttatagggcttcgtgatcatccctgtgtcacactctgcaatccagga
gtggagccaagcgtaccaagactgattgaatcgtgtggtcgtctttgtgtgcttgaagca
tgcgatttagccgaagcggccctgaggttgcgcgaaggcgtgttgagccgtgacgcattt
tacaattggctgaccacgccaggcattgcccttcgggaggatctgccccatttgcgataa
DBGET
integrated database retrieval system
