Sphingobium chlorophenolicum: Sphch_2613
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Entry
Sphch_2613 CDS
T01522
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sphch_2613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_2613
Enzymes [BR:
sch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sphch_2613
DNA repair and recombination proteins [BR:
sch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sphch_2613
Prokaryotic type
Sphch_2613
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEG50258
UniProt:
F6EZS4
LinkDB
All DBs
Position
1:complement(2781593..2782291)
Genome browser
AA seq
232 aa
AA seq
DB search
MSDTIKLDESWRAPLLQEFESPYMQGLKRFLQEEKAQGKRIFPKGGEYFRALDLTPLDKV
KVVVLGQDPYHGEGQAHGLCFSVKPGVRTPPSLVNIYKELQSDLGLRPPRHGFLEHWARQ
GVLLLNSVLTVEMGKAASHQKRGWEQFTDAIVRLVNQKSDPVVFLLWGSYAQRKAEFVDR
SRHLVLKAAHPSPLSAHNGFLGCRHFSQANAFLEEKGRGAIDWGLPETVAAA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccatcaagctggacgagagctggcgcgccccgctgctccaggaattcgaa
agtccctatatgcaggggctgaaacgctttcttcaggaggagaaggcgcaggggaaacgc
atctttcccaagggcggcgaatatttccgggcgttggacctgacgccgctggacaaggtg
aaggtggtcgtgctggggcaagacccctatcatggcgaggggcaggcgcatgggctgtgc
ttttcggtgaagccgggggtgcggacgccgccgtcgctggtcaatatctacaaggaattg
cagagcgacctggggctgcggccaccgcgccacggtttcctggaacattgggcgcgacag
ggcgtgctgctgctgaacagcgtcctgacggtggagatgggcaaggccgcgtcgcaccag
aagcggggctgggagcagtttaccgacgccattgtccggctggtcaaccagaagagcgat
ccggttgtcttcctgctctggggcagctatgcgcagcgcaaggcggaattcgtggaccgc
agcaggcatctggtgctgaaggcggcccatccttctccgctgtcagcgcataacggcttt
ctggggtgcaggcatttctcgcaggccaacgcctttctggaggagaaagggcgcggggcg
atcgactggggcttgccggagacggtggcggcggcatga
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