Sphingobium chlorophenolicum: Sphch_2639
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Entry
Sphch_2639 CDS
T01522
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch02020
Two-component system
sch02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sphch_2639
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sphch_2639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sch03021
]
Sphch_2639
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sch02035
]
Sphch_2639
Transcription machinery [BR:
sch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sphch_2639
Bacterial motility proteins [BR:
sch02035
]
Flagellar system
Flagellar assembly proteins
Stator
Sphch_2639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AEG50284
UniProt:
F6F060
LinkDB
All DBs
Position
1:2803642..2804379
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AA seq
245 aa
AA seq
DB search
MFMNRVVAGSDANTYGRSAHASSPERLARQYMPLVRKTAWHVHGRVSSAIEIEDLLQIGM
VALVEAANGFEDRGLGFASYAQMRVRGAMIDHLRRHATMTRSAMAQRKQLAGIRNRLEQK
LGRIPLESEMSAEMGLDPAAYREVADGCEMVQHTSMDEVYSDQSMWFADVEERADDVMER
ESLKAALAKCIGDLPQREALVLQLYFVEELNLEEIGATLDIGAARVCQIKKAALDKLREK
LRDWD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgaacagggtcgtcgccggttccgatgccaacacctatggccggtccgcccat
gccagttcgccagaaaggctggcgcgccaatatatgccgctggtgcgcaagactgcctgg
catgtccatggccgggtatcgagcgccatagagatagaggatcttctccagatcggcatg
gtcgcgctggtcgaggccgccaatgggttcgaggatcgcgggttgggtttcgcttcctat
gcgcagatgcgggtgcggggagcgatgatcgaccatctgcgccgccacgcgaccatgacg
cgatccgccatggcccagcgcaagcagttggcgggcatccgcaaccggctggaacagaaa
ttgggccgcattccgctggaatcggaaatgtccgcggagatggggctggaccccgccgcc
tatcgcgaagtcgccgacggttgcgagatggtgcagcacacgagcatggacgaggtctat
tccgaccagtccatgtggttcgccgatgtcgaggaacgcgccgatgacgtgatggagcgg
gagtcgctgaaggcggcgctcgccaagtgcatcggcgatctgccgcagcgcgaggctttg
gtgcttcagctttatttcgtcgaggaactgaatctggaggaaatcggcgcgacgctggac
atcggcgcggcgcgggtctgccagatcaagaaggctgccctcgacaagctgcgcgagaaa
ttgcgggattgggattga
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