Sphingobium chlorophenolicum: Sphch_3894
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Entry
Sphch_3894 CDS
T01522
Name
(GenBank) transcriptional regulator, LysR family
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sch03000
]
Sphch_3894
Transcription factors [BR:
sch03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sphch_3894
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
PapG_C
Motif
Other DBs
NCBI-ProteinID:
AEG51475
UniProt:
F6F1Q9
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Position
2:1145362..1146507
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AA seq
381 aa
AA seq
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MIWSLNLRHLRSAAAIARLGSISAAAQTVGITQPAITQGIARLEEQLHTPLFVRGPAGMT
ATPAMILLAPRMEAALGHINSSRVTMAQMRALIALADGGGYPGASTLSGLAQTTLHRAVR
DLSLALRRILVDRRGRSIVFTEAGRRTLRSFRLACAELVAGLGDLAALNGRETGRIAVGA
MPLSRARLLPAAINAFRKLRPDAQVSVVEGSFTELVDPLRDGEIDCMLGALRSPPPGENL
IQTPLFEDRPVVIGRNGHPLTGSAPDLAQLARYDWIVPPPGTPLRILWDRMFQAANIASP
RVPVECGSVMTIRELLLDSDALTLLSRDQLSVELEAGWLSVIAQAPKQVTRTIGLTVRAD
WRPTAMQAVFLDAIRQTVSIP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatctggtcgctcaacctccgccatcttcggtccgccgccgccattgcccggctcggc
agcatctccgccgccgcgcagacggtcggcatcacccagcccgccatcacccaggggatt
gcccggctggaggagcaactgcatacgccgctgttcgtgcgcggcccggccgggatgacc
gccacgcccgccatgatactgctggccccgcgcatggaggcggcgctgggtcacatcaat
tcctcccgcgtgaccatggcgcagatgcgggcgctgatcgccctggcggacggtggcggt
tatccgggggccagcaccctgagtgggttggcccagacgacactgcaccgggccgtacgt
gacctttccctcgcgttgcgccggattctggtcgaccgacggggacgcagcattgtattc
accgaagcggggcggcgcacattgcgcagctttcgcctggcctgcgctgaactcgtggcg
ggcctcggcgaccttgccgccctgaacggacgggagaccgggcggatcgcggtgggggcg
atgccgctctcgcgcgcgcgcctgctgcccgccgccatcaacgcctttcgcaaactgcgg
cccgatgcccaggtctccgtcgtggaaggttccttcaccgaactggtcgatccgctgcgt
gacggcgagatcgactgcatgctgggcgcgctgcgctcgccgccacccggcgaaaacctg
atccagacgcccctgttcgaagaccggccggtcgtcatcgggcggaacggacatccgctg
accggcagcgcgcccgatctggcgcagcttgcccgatatgactggatcgtcccgccgccc
ggcacgccgctgcgcatcctgtgggaccggatgttccaggcggcgaacatcgcctctccc
cgcgttcctgtcgaatgcgggtcggtgatgaccatccgggaactgctgctggacagtgat
gcgctgactctgctgtcccgcgatcagctttccgtcgagctggaggccggatggctgagc
gtcatcgcgcaagcaccgaagcaagtgacccgcaccatcggcctgacggtgcgggcggat
tggcggccgaccgctatgcaggccgtcttcctcgacgcaatcagacagacggtatcgatc
ccataa
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