Sphingobium chlorophenolicum: Sphch_3942
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Entry
Sphch_3942 CDS
T01522
Name
(GenBank) putative circadian clock protein, KaiC
KO
K08482
circadian clock protein KaiC
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Sphch_3942
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
nSTAND3
RecA
AAA_22
DnaB_C
GvpD_P-loop
IstB_IS21
AAA_14
NPHP3_N
MEDS
PAXNEB
SLFN-g3_helicase
AAA_5
AAA_24
AAA_18
AAA
AAA_30
AAA_19
AAA_7
NACHT
AAA_28
AAA_29
AAA_11
AAA_33
TrwB_AAD_bind
DAP3
Viral_helicase1
Zeta_toxin
NTPase_1
cobW
TIP49
ATPase_2
Mg_chelatase
Rad51
Sigma54_activat
DEAD
PhoH
APS_kinase
T2SSE
AAA_23
Sigma54_activ_2
Antimicrobial_8
Motif
Other DBs
NCBI-ProteinID:
AEG51522
UniProt:
F6F1V6
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All DBs
Position
2:1205425..1206921
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AA seq
498 aa
AA seq
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MSEMQIISTGNSGLDTILKGGLPANHLYLLEGAPGSGKTTLALQFLREGIARGEAVLYIT
LSETSEELRVVAASHGWTLDGFDVFELESVENVFGEGREQSIIHPWEMELGETIRLIQQE
VDRVKPSRVVFDSLSEMRLLAQDPLRYRRQVLALKQFFSGRDSTVILIDDMTGTTKARDA
HLHSLCHGVITLERLTLEFGAARRRMQVQKLRGIDFIAGFHDLNIRKGGVDIFPRLIAAD
HHAEFSEGAVTSGVGALDDLLGGGPLRGSSILITGPAGTGKTTIALQYLHAACERGEPCT
IFEFDERIGTLLTRAKAFGLDVAHQIDQGRLVIQQIDPAEISPGEFAARVRHEVESRGVR
MIAIDSLNGYMAAMPQEQQLLLQMHELLSYLSQQGVVTFLLNPQQGLVGSMATNLNISYI
ADSVILLRFFEAGGRIRKAISVIKNRSGMHEDRIREFRIDSRGVRVGEPLEAFRGVLTGT
PEYIGSATPLMEDRDHGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatgcagatcatatccaccggcaattccggcctggacacgattctcaagggc
gggctgcccgccaaccacctctatctgctcgaaggagcgcccggctccggcaagaccacg
ctcgccctccagttcctgcgggaaggcatcgcgcggggcgaagccgtactctatataacc
ctgtcggagacgagcgaggaactgcgcgtcgtcgccgcgtcccatggctggacgctggac
gggttcgacgtcttcgaactggaatccgtggaaaatgtgttcggcgaaggccgggagcag
tcgatcattcatccctgggagatggaattgggcgaaaccatccgcctcatccagcaagag
gtggatcgggtgaagccgagccgcgtggtattcgacagcctgtcggaaatgcggttgctg
gcgcaagatccgctgcgctatcgtcggcaggtcctggcgctgaagcagttcttctccggc
cgcgacagcaccgtcatcctcatcgacgacatgacggggacgaccaaagcgcgcgacgcc
catcttcacagcctttgccatggcgtcatcacgttggagcgcctcaccctggaattcggc
gcggcgcgccgccgaatgcaggtccagaagctgagaggcatcgatttcatcgccggcttc
cacgacctcaatatccgcaagggcggcgtcgatatctttccgcgcctcatcgccgcggac
catcatgccgaatttagcgagggcgcggtgaccagcggcgtcggcgcactggacgatctg
ctcggtggcggcccgctgcgcggcagcagcatcctgatcaccgggccggcgggaaccggg
aaaaccaccattgccctccaatatctccacgcggcctgcgaacgcggcgaaccctgcacc
atcttcgaattcgacgagcgcattggcacattgctgacccgcgccaaggcgttcggcctc
gacgtcgcgcaccagatcgatcagggaaggctggtcatacagcagatcgaccccgccgaa
atctcgccgggcgaatttgcggcgcgcgttcgccatgaagtcgaaagtcgcggcgtccgc
atgatcgccatcgacagtctcaacggttatatggccgcgatgccgcaggagcagcaactc
ctcctccagatgcacgaattgctttcctatttgagccagcagggggtcgtgacattcctc
ctcaacccgcaacagggtctggtcgggtcgatggcgaccaacctgaacatatcctacatc
gccgattccgtgatcctgctgcgcttcttcgaagcgggcgggcgcattcgcaaggcgata
tcggtgatcaagaaccgcagcggcatgcatgaggataggatccgggaattccggatcgac
agcagaggcgtgcgcgtcggagagccgctggaggccttcaggggcgtgctgaccggaacg
ccggaatatatcggcagcgcgacgcctttgatggaggatcgagaccatggcgcatga
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