Streptomyces chartreusis: CP983_11470
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Entry
CP983_11470 CDS
T07157
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scha
Streptomyces chartreusis
Pathway
scha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP983_11470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scha03019
]
CP983_11470
03400 DNA repair and recombination proteins [BR:
scha03400
]
CP983_11470
Enzymes [BR:
scha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP983_11470
Messenger RNA biogenesis [BR:
scha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP983_11470
DNA repair and recombination proteins [BR:
scha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP983_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QEV67235
LinkDB
All DBs
Position
2764915..2767080
Genome browser
AA seq
721 aa
AA seq
DB search
MEHTSNADLRTAADAVLARLVGDDTGTARLREDQWRAIEALVADRRRALVVQRTGWGKSA
VYFVATSLLRSQGSGPTVIVSPLLALMRNQVDAAARAGIHARTINSSNTEEWDTIQSEIA
AGEVDVLLVSPERLNNPDFRDQVLPKLASATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPPGVPVLATTATANARVTADVAEQLGTGGTSDALVLRGPLDRDSLSLSVLRLPDAAH
RMAWLADHLDDLPGSGIIYTLTVAAAEEVTAFLRHRGHTVASYTGKTENADRQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGQE
DEAIWQYFASLAFPSEDLVHRTLDVLARSDRPLSLPALEPLVELRRSRLETMLKVLDVDG
AVHRVKGGWIATGQPWVYEAERYDWVARQRTAEQQAMREYASTTGCRMEFLQRQLDDEGA
KPCGRCDNCAGARFTADMSSVALDAARVDLGRAGVEVEPRRMWPTGLPAIGVDLKGRIPA
GEQAAPGRALGRLSDIGWGNRLRPMFAPHAPDGPVPDDVAKAVVGVLVDWAKGPDGWASG
AQDAVPRPVGVVTIASRTRPQLINSLGARIAEVGRLPLLGSLEYSGEGSSVSRSNSAQRL
KALDGALNVPGDLASALSENPGPVLLVDDFTETGWTLAVAARMLRRAGAQGVMPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaacacacgagcaacgcggatctgcggacggccgccgacgcggtcctcgcccgcctc
gtcggggatgacaccggcacggcccggctgcgcgaggaccagtggcgagcgatcgaggca
ctggtcgccgacagacgccgcgcgctcgtggtccagcggacggggtggggcaagtccgcg
gtctatttcgtggccacgtccctgttgcggtcccagggcagcgggcccaccgtgatcgtt
tccccgctgctcgccctcatgcgcaaccaggtcgacgcggccgcccgggccggcatccac
gcacgcaccatcaactcctccaacaccgaggagtgggacacgatccagagcgagatcgcc
gctggtgaagtcgacgtgctgctcgtctcgccggaacgcctcaacaaccccgacttccgc
gaccaggtactgcccaagctggcctcggcgaccggcctgctcgtggtggacgaggcgcac
tgcatctcggactggggccatgacttccgtccggactaccgacggctgcgcaccatgctc
gccgacctcccgcccggagtgcccgtgctggcgacgaccgccaccgccaacgcgcgcgtg
accgccgacgtcgccgaacagctcggcaccgggggcacgtcggacgccctggtgctgcgc
ggcccgctggaccgcgacagtctgagcctgagtgtcctgcgtctaccggacgccgcgcac
cggatggcctggctcgccgatcacctcgacgacctgcctggctcgggcatcatctacacg
ctcacggtggccgccgccgaggaggtcacggccttcctgcggcatcgcgggcacacggtt
gcctcctataccggcaagacggagaacgccgaccgccagcaggccgaggacgacctgctc
gccaacagggtcaaggccctggtcgccacctccgcgctcggcatgggcttcgacaagcct
gacctgggcttcgtggtgcacctcggttcgccctcctcccccatcgcctactaccagcag
gtcggtcgtgccggccgcggcgtcgagcacgccgaggtgctcctgcttcccggacaggag
gacgaggcgatctggcagtacttcgcctcgctcgccttcccgtcggaggacctggtgcat
cgcacgctcgatgtcctcgcccggtcggacaggccgctgtcgctgcccgccctggagccc
ctcgtcgagctgcgacgctcccgtctggagaccatgctcaaggtcctggacgtggacggc
gcggtccaccgggtcaagggcggctggatcgccaccgggcagccttgggtgtacgaggcc
gagcgctacgactgggtcgcccggcaacgcacggccgagcagcaggcgatgcgcgagtac
gcctcgacgacgggctgccgcatggagttcctccagcgtcagctcgacgacgagggagcc
aagccctgcggccgctgcgacaactgcgcgggcgcgcgcttcaccgccgatatgtcgtcc
gtcgcgctggacgccgcgcgcgtcgacctgggccgagcgggcgtcgaggtggagccgcgc
cgcatgtggccgaccggcctcccggcgatcggcgtcgacctcaagggacgtatccctgcc
ggtgaacaggctgctccggggagggctttggggcggctgtcggacatcgggtggggcaac
cgtctacgaccgatgttcgcgccccacgcccctgacgggcccgtgcccgacgacgtggcg
aaggcagtcgtgggcgtcctggtcgactgggccaaggggcccgacggctgggcttccggg
gctcaggacgcagtaccgcgcccggtcggcgtggtcaccatcgcctcgcgcactcggccg
cagctgatcaactcccttggcgcgcgtatcgcggaggtcggccgactcccgctgctcggc
tccctggagtactccggtgagggctcttcggtctcccggagcaacagcgcacagcggctg
aaggcgctggacggcgcgttgaacgtgcctggtgatctggcttcggcactctccgaaaac
ccgggccccgtgctgctggtggacgacttcacggagacgggctggactctcgctgtcgcc
gcccgcatgctccggcgcgcgggggcacagggggtcatgccattggttctggccgttcag
gggtga
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