Streptomyces chartreusis: CP983_14435
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Entry
CP983_14435 CDS
T07157
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scha
Streptomyces chartreusis
Brite
KEGG Orthology (KO) [BR:
scha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scha03021
]
CP983_14435
Transcription machinery [BR:
scha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP983_14435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_24
MarR_2
Sigma70_ECF
NirdL-like_HTH
MarR
IF2_N
HTH_3
HTH_Crp_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
QEV67763
LinkDB
All DBs
Position
3440527..3441708
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AA seq
393 aa
AA seq
DB search
MRNGDGPVRDEERGTRELPDTPPSSGGTGSAGAGPDGPSVSRRMADGIDGIPEQARPHPE
DDSVVTGLQGGPGDDGAVQGAPLGGRIGVSPVPGGPPARPKSRVRTEARARERATGGTMS
EHQRDADHEATAARSAQATQHDPQDRSGARALFVELRKLQDGSPEYAELRNRLVRMHLPL
VEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDK
GWAVRVPRRLQELRLALTTATAELSQQHGRSPTVHELAEKLAISEEEVLEGLESANAYST
LSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQ
SQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaacggggacgggccggtgcgggacgaagagcgcggcacacgagagctgccggac
actccccccagctcgggcgggaccgggagtgcgggagcgggccctgacggcccgagcgtc
tcccgacgcatggcggacggcatcgacggcatccccgagcaggcccggccgcacccggag
gacgactccgtggtgaccggcctccagggcggcccgggggacgacggtgctgtgcagggc
gcgcctctgggcgggcgaatcggggtctccccagtccccgggggtcctcccgctcgaccg
aagtcgagagtgaggacggaggcgagggctcgggagagggcgacgggcgggacgatgagc
gagcaccagcgagacgccgaccacgaggcgacggccgcgcgcagcgcgcaggccacgcag
cacgacccacaggaccgcagcggggctcgcgccctgttcgtcgagctgcgcaagctgcag
gacggcagcccggagtacgcggagctgcgcaaccggctggtccgtatgcacctgccgctc
gtcgagcacctcgcacgccgcttccgcaaccgcggtgagccgctggacgacctgacccag
gtcgccaccatcggtctgatcaagtcggtcgaccgcttcgacccggaccgcggcgtcgag
ttctcgacctacgcgaccccgacggtcgtcggtgagatcaagcgccacttccgcgacaag
ggctgggcggtgcgcgtcccgcggcgcctccaggagctgcgcctcgcgctcaccacggcc
accgccgaactgtcccagcagcacggccgctccccgaccgtccacgaactcgccgagaag
ctggcgatctcggaggaggaggtcctggagggcctggagtccgcgaacgcgtactccacg
ctgtccctggacgtccccgacaccgacgacgagtccccggcggtcgcggacaccctgggc
gcggaggacgaggcgctggagggcgtcgagtaccgcgagtccctcaagccactccttgag
gacctcccgccgcgcgagaagcggatcctgctgctgcgcttcttcggcaacatgacccag
tcgcagatcgcgcaggaggtcggcatctcccagatgcacgtctcccgcctgctggcccgc
actctggcccagctgcgggagaagctgctggtggaggagtag
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