Streptomyces chartreusis: CP983_18515
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Entry
CP983_18515 CDS
T07157
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
scha
Streptomyces chartreusis
Brite
KEGG Orthology (KO) [BR:
scha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scha03016
]
CP983_18515
Enzymes [BR:
scha01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CP983_18515
Transfer RNA biogenesis [BR:
scha03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CP983_18515
Prokaryotic type
tRNA splicing ligases
CP983_18515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QEV68476
LinkDB
All DBs
Position
complement(4319335..4320528)
Genome browser
AA seq
397 aa
AA seq
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MSYVEMPGAKVPIRMWADPATIEGSALQQLQNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMHGAVCPAAVGVDIGCGMSAVRTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDSPVDPG
RLHGFGTSGWDGFWGRFEGVAEAVKFRQERATKQMGTLGAGNHFAEVTVCDSGQVWLMLH
SGSRNIGKELAEHHIGVAQKLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
TIMMALLKDVIRKEFKKAKPTFEPEISCHHNYVAEERYEGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVKGLGNEKAFNSASHGAGRRMSRNAAKRRFTTKDLEEQTRGVECRKDSG
VVDEIPAAYKPIEQVIDQQRDLVQVVAKLKQVICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgaaggttcccatccgtatgtgggccgacccggcg
acgatcgagggctccgcactccagcagctccagaacgtcgcgaccctgccgtggatcaag
ggcctcgccgtgatgccggacgtgcattacggaaagggcgcgacggtcgggtccgtcatc
gcgatgcacggggccgtgtgccccgcggcggtcggcgtggacatcggctgcggtatgtcg
gcggtgcggacgtccctgacggcgaacgacctgccgggggacctgtcccggctgcggtcg
aagatcgagcaggcgattccggtggggcggggcatgcatgacagccctgtcgaccccggc
cggctgcacggcttcggcacgtcggggtgggacggcttctgggggcggttcgagggggtc
gccgaggcggtgaagttccgtcaggagcgggcgaccaagcagatgggaacgctcggagcc
gggaatcactttgcggaagtaaccgtttgcgattctgggcaggtgtggctgatgctgcac
tccggttcgcgcaacatcggcaaggaactggccgagcaccacatcggcgtggcccagaag
ctcccgcacaaccagggtctggtggatcgcgatctcgccgtcttcgtggcggacactccg
cagatggcggcgtaccgaaacgacttgttctgggcgcaggagtacgccaagtacaaccgc
acgatcatgatggctctcctcaaggacgtcatccgcaaggagttcaagaaggcgaagccg
accttcgagccggagatttcgtgtcaccacaattatgtggccgaggaacggtacgaaggc
atggatctgctcgtgactcgtaaaggcgcgatccgggccggctccggtgaatacgggatc
attccgggttcgatggggacgggctcgtacatcgtgaagggtctcggcaacgagaaggcc
ttcaactcggcgtcccacggcgcgggtcggcgcatgagccgtaacgcagcgaagcgtcgc
ttcacgacgaaggacctggaggagcagaccaggggcgtggagtgtcggaaggactccggc
gtcgtggacgagattccggctgcatacaagccgatcgagcaggtcatcgatcagcagagg
gaccttgtccaggtcgtggccaagctgaagcaggtcatctgcgtgaaggggtag
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