Streptomyces chartreusis: CP983_28670
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Entry
CP983_28670 CDS
T07157
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
scha
Streptomyces chartreusis
Pathway
scha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP983_28670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scha03019
]
CP983_28670
03009 Ribosome biogenesis [BR:
scha03009
]
CP983_28670
Enzymes [BR:
scha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CP983_28670
Messenger RNA biogenesis [BR:
scha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP983_28670
Ribosome biogenesis [BR:
scha03009
]
Prokaryotic type
rRNA processing factors
CP983_28670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QEV70224
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All DBs
Position
6525553..6529521
Genome browser
AA seq
1322 aa
AA seq
DB search
MLEPTEPTEGSELNTPSDTLPPRRRRRAASRPAGPPVAATEAQPAEVVEPAIPVAEAADV
AAVTEEAEKPEEIIEAVEAEVTPEATEDEEAQQGEETTEAAPTGRPRRRAVRRASAPAGA
PEAAEAAETVVPVTAAAPVAEEATPAAAAESTEAPAPRTRRRAVRRASAPAGAPAPVEAA
EPAAEAPATVEAPADVETAEVAEEAAPRRTRRRATRRVSAPAGAPDAAETPTEAEAPAAV
ETAEPVEAAEEAAPRRTRRRATRRVTEEAPVETPESTEKPVTAEETPEVPETVAEETPAE
TGEDAGPRRRRRVVRRAAAGFAEPARAAAKAEQSEQDTEDAPRPARPSVAVFQAPVFTEP
QFQTPERAAAQAAAAEAETEDVEEFPEEQAGASRRRRRRRSGGFAEETETQVAETTAEDE
TEEAEEGAEDIADGEETEETGSRRRRRRGGRRRRRGESAESDAEGDDTDEAAAAQAEQDA
EDTAEQEEEDAEDGRDDGSGSSSSSRRRRRRRRRAGDSSTDTEPGDGDPERTVVKVREPR
PKAEPSDEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQH
GDRTQIGVLEDNVLVEHYVNKEQSTSYVGNVYLGKVQNVLPSMEAAFIDIGKGRNAVLYA
GEVNFEALGMANGPRRIESALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEG
SMTGISRKLPDTERARLKTILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQAQWEDIQ
KKAKSGNAPSLLYGEPDMTVRVVRDIFNEDFSKVVVSGDDAWSTIHGYVSHVAPDLAERL
SKWTSEVDVFATYRIDEQLAKALDRKVWLPSGGSLVIDRTEAMVVVDVNTGKFTGQGGNL
EETVTRNNLEAAEEIVRQLRLRDLGGIIVIDFIDMVLESNRDLVLRRLLECLGRDRTKHQ
VAEVTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHMEQPTSAGGGGGKRKKRARA
GAGPEHVHEASVATEPAETAEEEAETEAEVAAEAAEPAALPEPAFAPDEELYSSVAEAEA
AAGRGGRSRRRGGRRVSAPAGAPRKAEAVPTAQDVTVAEEIERPVRPEPAAEVKAEPAAV
EDAVVQTEAPAAEEAAPKGRTRRRATRKVSAPAGSPAGAEAAVVTVAETAAAEPAEETAA
EPVAESAAPARPRRRAVRKATAPSASDEAAVLVVPAGEAPAEPAAEAQAPAAEEGVEEAA
PAKKTARKTAKKATAKKAATKKTAAKKTVAKKTTAKKAAKTAKTAAAKATAKKTTVSAAT
DE
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccgaccgaacccaccgagggttccgaactgaacactcccagcgacaccctg
ccgccgcgccgtcggcgtcgtgcggcgtcccgcccggcgggaccgcccgtggccgccacc
gaggcgcagcccgcggaggttgtcgagccggccataccggtcgccgaggccgccgatgtc
gcggccgtgaccgaagaggccgagaagcccgaggagatcatcgaggccgtcgaggccgag
gtgactcccgaggccaccgaggacgaagaggcccagcagggcgaggagacgacggaggcc
gcacccaccggtcgtccgcgccgccgtgccgtacgccgtgcctccgcgcccgccggtgcg
cccgaggccgccgaagccgccgagaccgtcgttcccgtgacggccgccgcgccggtcgcc
gaggaagcgaccccggccgccgccgcggagagcaccgaggcgcccgcgccccgtacgcgt
cgccgtgccgtgcgccgcgcgtcggcacccgccggtgcccccgcgcccgtcgaggcggcc
gagcccgccgccgaggcgcccgccacggtcgaggcgcccgccgacgtggagaccgccgag
gtggccgaagaggccgccccgcgtcgcacccgccgccgtgccacccgccgggtgtccgcg
cccgccggtgctccggacgccgccgagacccccaccgaggcggaggcgcccgccgctgtc
gagaccgccgaacccgtggaggccgccgaggaggccgcgccgcgtcgcacgcgtcgccgt
gccacccggcgcgtgaccgaggaggcccccgtcgagacccccgagtccaccgagaagccg
gtgacggcggaggagacccccgaggtccccgagaccgttgccgaggagacccccgccgag
accggtgaggacgccggcccccgtcgccgtcgccgcgtcgtccgtcgcgccgccgccggg
ttcgccgagcccgcccgcgccgccgccaaggccgagcagtccgagcaggacaccgaggac
gcaccgcgcccggcgcggccctccgtggccgtgttccaggcgcccgtcttcaccgagccc
cagttccagacgcccgagcgcgccgccgcccaggccgccgccgcggaggcggagaccgag
gacgtcgaggagttcccggaggagcaggccggcgcgtccaggcgccgtcgccgtcgccgc
agcggcggattcgccgaggagaccgagacccaggtcgccgagaccaccgccgaggacgag
accgaggaagccgaagagggcgccgaggacatcgccgacggcgaggagaccgaggagacc
gggtcccgtcgccgccgccggcgtggcggccgtcgccgccgtcgcggcgagagcgcggag
tcggacgccgagggcgacgacaccgacgaggccgccgccgcgcaggccgagcaggacgcc
gaggacaccgccgagcaggaggaagaggacgccgaggacggccgcgacgacggctccggg
tccagctcctccagccggcgccgccgtcgccgtcgccgtcgcgccggtgactcctccacg
gacaccgagcccggcgacggcgaccccgagcgcaccgtcgtcaaggtccgcgagccccgc
ccgaaggccgagccgtccgacgaggtgcagtccatcaagggctccacccgcctggaggcc
aagaagcagcgccgccgtgaaggccgcgagcagggccgccgcagggtgccgatcatcacc
gaggccgagttcctggcccgccgtgaagcggtcgagcgggtgatggtggtccgccagcac
ggcgaccgtacgcagatcggcgtcctcgaggacaacgtgctcgtcgagcactacgtcaac
aaggagcagtcgacctcctacgtcggcaacgtctacctgggcaaggtccagaacgtgctg
ccgtcgatggaggccgccttcatcgacatcggcaagggccgcaacgccgtgctctacgcc
ggtgaggtcaacttcgaggcgctgggcatggccaacgggccgcgccgtatcgagtccgcc
ctgaagtccggccagtcggtcctcgtccaggtgacgaaggacccgatcggtcacaagggc
gcccgtctgaccagccaggtctccctgccgggccgctacctcgtgtatgtccccgagggc
tcgatgaccggcatcagccgcaagctgcccgacaccgagcgggcgcggctgaagaccatc
ctcaagaagatcgtccccgaggacgcgggcgtcatcgtgcgcaccgccgccgagggcgcg
agcgaggacgagctgcgccgggacgtcgaacggctccaggcgcagtgggaggacatccag
aagaaggccaagagcggcaacgccccgtcgctgctgtacggcgagccggacatgaccgtc
cgggtcgtgcgggacatcttcaacgaggacttctccaaggtcgtcgtcagcggtgacgac
gcctggtcgacgatccacgggtacgtctcgcacgtcgccccggatctggccgagcggctc
tcgaagtggacctccgaggtcgacgtcttcgccacgtaccggatcgacgagcagctcgcc
aaggcgctggaccgcaaggtctggctgcccagcggcggttcgctggtgatcgaccggacc
gaggcgatggtcgtcgtcgacgtcaacaccggcaagttcaccggtcagggcggcaacctc
gaggagaccgtcaccaggaacaacctggaggcggccgaggagatcgtccgccagctgcgg
ctgcgcgacctcggcggcatcatcgtcatcgacttcatcgacatggtgctggagtccaac
cgggacctggtgctgcggcgtctgctggagtgcctgggccgggaccggaccaagcaccag
gtcgccgaggtgacctcgctgggcctggtccagatgacccgcaagcgggtcggccagggc
ctgctcgagtccttctccgagacctgcgtccactgcaacggccgcggcgtcatcgtgcac
atggagcagccgacgtccgccggcggtggcggtggcaagcgcaagaagcgcgcgcgggcc
ggtgccggtcccgagcacgtccacgaggcgtccgtcgccaccgagccggccgagacggcc
gaggaggaggcggagaccgaggccgaggtcgcggcagaggccgccgagccggccgcgctg
cccgagccggcgttcgcgcccgacgaggagctgtacagcagcgtcgccgaggcggaggcc
gcggcgggccgtggcggtcgttcgcggcgccgcgggggccggcgggtgtcggctccggcg
ggtgcgccgaggaaggccgaggcggtccccaccgctcaggacgtgaccgtcgccgaggag
atcgagcgcccggtccggcccgagccggccgcggaggtcaaggccgagcccgcggcggtc
gaggacgcggtcgtgcagaccgaggccccggccgccgaggaggccgcacccaagggccgt
acgcggcgtcgcgccacccgcaaggtgtccgcgcccgccgggtcgcccgcgggggccgag
gccgccgtcgtgacggtcgccgagacggccgccgccgagccggccgaggagaccgccgcc
gagccggtcgccgagagcgccgccccggcccgtccgcgtcgccgtgccgtgcgcaaggcc
accgcgccgagcgcgtccgacgaggcggccgtcctggtcgtcccggcgggcgaggcaccg
gccgagcccgctgccgaggcgcaggccccggccgcggaggagggcgtcgaggaggccgct
ccggccaagaagacggcccgtaagacggccaagaaggcgacggcgaagaaggccgccacc
aagaagaccgcggccaagaagacggtcgccaagaagacgacggccaagaaggcggcgaag
accgccaagacggccgcggccaaggcgacggcgaagaagaccacggtctccgccgccacc
gacgagtga
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