Streptomyces chengbuensis: QRN89_07925
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Entry
QRN89_07925 CDS
T10474
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sche Streptomyces chengbuensis
Pathway
sche03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QRN89_07925 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_07925 (uvrA)
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QRN89_07925 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QRN89_07925 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
AAA_33
nSTAND1
AAA_25
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
HC2
BCA_ABC_TP_C
HTH_5
DUF963
Motif
Other DBs
NCBI-ProteinID:
WJY49738
LinkDB
All DBs
Position
complement(1761555..1764569)
Genome browser
AA seq
1004 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPITRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQSKGYARARV
DGQTIQLTEPPKLKKQEKHTIEVVIDRLTVKESAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIVP
DEDRSLDDGAIHPWSHGHTKEYFGRLIGGLADALGFRTDIPWAGLPQRAKKALLYGHKTQ
VEVRYRNRYGRERAYTTPAFEGAVSFVKRRHSEAESDSSRERFEGYMREVPCPTCDGTRL
KPIVLAVTIMERSIAEVSAMSISECADFLGRLTLTARDKKIAERVLKEVNERLRFLVDVG
LDYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRL
RDMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGPLKQLLANKDSMTGLYLSG
KKSIATPEIRRPVDGARRLTVHGARENNLRDIDVSFPLGVLTAVTGVSGSGKSTLVNDIL
YTHLARELNGAKSVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLF
AETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRET
LEVHYKGKSIAEVLDMPIEEALHFFEAVPTISRHLKTLTEVGLGYVRLGQPAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLINVLSGLVDKGNTVIVIEHNLDVI
KTADWVVDMGPEGGSGGGLVIAEGTPEQVAAVPTSHTGKFLRDILGPDRISDSVPPQSRK
TAAKKTASRKAVSANSTPVRKKTVTADATPVKKAAATRSRARKA
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaacctcaagaacgtctcgctc
gacctcccgcgtgactcactcatcgtcttcaccgggctctcggggtcgggcaagtcgtcg
ctcgcgttcgacacgatcttcgccgagggacagcgccgctacgtcgagtcgctgtcctcc
tacgcccggcagttcctgggccagatggacaagccggacgtggacttcatcgagggcctc
tccccggccgtctcgatcgaccagaagtccacctcgcggaacccccgctcgaccgtgggc
acgatcaccgaggtctacgactacctccggctgctcttcgcgcgcatcggcaagccgcac
tgcccggagtgcggccgccccatcacgcgccagtccccgcaggccatcgtcgacaaggtg
cttgagctgcccgagggcagccgcttccaggtgctgtcgccgctggtgcgggagcgcaag
ggcgagttcgtggacctcttcgccgacctccagtccaagggctatgcgcgagcgcgggtc
gacgggcagacgatccagctcaccgagccgccgaagctgaagaagcaggagaagcacacg
atcgaggtggtcatcgaccgcctgaccgtcaaggagagcgccaagcgccggctcacggac
tccgtggagaccgcgctgggcctgtccggcggcatggtcgtgctggacttcgtcgacctc
cccgaggacgaccccgagcgcgagcggatgtactcggagcacctgtactgcccgtacgac
gacctctccttcgaggagctcgaaccccgctcgttctccttcaactcgccgttcggagcc
tgccccgactgcaccggcatcggcacgcggatggaggtcgaccccgagctgatcgtcccg
gacgaggaccgctccctcgacgacggtgccatccacccctggtcgcacggccacaccaag
gagtacttcgggcgcctcatcggcgggctcgccgacgccctcggcttccgcaccgacatt
ccgtgggccgggcttccgcagcgcgccaagaaggccctgctgtacggccacaagacccag
gtcgaggtccgctaccggaaccggtacgggcgggagcgcgcctacaccaccccggcgttc
gagggcgcggtgtccttcgtcaagcggcgccacagcgaggcggagagcgactccagccgg
gagcgcttcgagggctacatgcgcgaggtgccctgccccacctgtgacggcacccggctg
aagccgatcgtcctggcagtgacgatcatggagaggtcgatcgccgaggtctcggccatg
tccatcagcgagtgcgccgacttcctgggaaggctgacgctcaccgcacgcgacaagaag
atcgccgagcgggtgctcaaggaggtcaacgagcggctgcggttcctggtcgacgtcggt
ctggactacctctccctcaaccgggcggcgggcacgctgtccggcggcgaggcacagcgc
atccggctggccacccagatcggctccgggctggtgggcgtgctgtacgtgctggacgag
ccgtccatcggacttcaccagcgcgacaaccaccggctcatcgagaccctggtgcggctc
cgcgacatgggcaacaccctgatcgtcgtcgagcacgacgaggacacgatcaaggtcgcc
gactgggtcgtggacatcggcccgggcgccggcgagcacggcggcaaggtcgtccactcc
ggaccgctgaagcagctgctggccaacaaggactcgatgaccgggctgtacctgtccggg
aagaagtccatcgcgacgccggagatccggcggcccgtggacggggcccgccggctcacg
gtgcacggcgcccgggagaacaacctccgggacatcgacgtgtcgttcccgctcggtgtg
ctcacggcggtcaccggcgtctccggctccggcaagtccacgctggtgaacgacatcctg
tacacgcatctggcgcgcgagctgaacggtgccaagtcggtgccgggccggcacacccgc
gtggacggcgacgacctcgtcgacaaggtcgtccacgtcgaccagtcgcccatcggacgc
acgccccggtccaacccggcgacctacaccggcgtcttcgaccacgtgcgcaagctcttc
gcggagacgatggaggcgaaggtgcgcggctatctgccgggccgcttctccttcaacgtc
aagggcggacgctgtgagaactgctccggcgacggcaccatcaagatcgagatgaacttc
ctcccggacgtctacgtcccgtgcgaggtctgccacggtgcccggtacaaccgggagacc
ctggaggtccactacaaggggaagtccatcgccgaggtgctggacatgccgatcgaggag
gcgctgcacttcttcgaggccgtgccgacgatctcccgtcacctcaagacgctgaccgag
gtgggtctcgggtacgtcaggctcggccagccggcgccgacgctctccggtggtgaggca
cagcgggtgaagctcgcgagcgagctgcagaagcggtccaccggccgcacggtctacgtg
ctggacgagccgaccacgggtctgcacttcgaggacatctccaagctgatcaacgtgctg
tccggactggtcgacaagggcaacacggtgatcgtgatcgagcacaacctcgatgtgatc
aagaccgccgactgggtcgtcgacatggggcccgagggcggcagcggcggtggcctcgtg
atcgccgagggcacgcccgagcaggtcgccgcggtgccgacgagccacacgggcaagttc
ctgcgggacatcctgggaccggaccgcatcagcgactcggtgccgccgcagtcccgcaag
acggcggcgaagaagaccgcgtcgaggaaggcggtctcggccaattccacgccggtgcgg
aagaagacggtgacggccgacgcgaccccggtcaagaaggccgcagcgacacggagccgc
gcccgcaaggcctga
DBGET
integrated database retrieval system
