Streptomyces chengbuensis: QRN89_08120
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Entry
QRN89_08120 CDS
T10474
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03030
DNA replication
sche03410
Base excision repair
sche03420
Nucleotide excision repair
sche03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QRN89_08120 (polA)
03410 Base excision repair
QRN89_08120 (polA)
03420 Nucleotide excision repair
QRN89_08120 (polA)
03440 Homologous recombination
QRN89_08120 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sche03032
]
QRN89_08120 (polA)
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_08120 (polA)
Enzymes [BR:
sche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QRN89_08120 (polA)
DNA replication proteins [BR:
sche03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QRN89_08120 (polA)
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QRN89_08120 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QRN89_08120 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
WJY54712
LinkDB
All DBs
Position
complement(1809732..1812389)
Genome browser
AA seq
885 aa
AA seq
DB search
MDGHSLAYRAFFALPAENFTTAGGQTTNAIYGFASMLANTLRDEAPTHFAVAFDVSRKTW
RSQDFPEYKANRSSTPDEFKGQVELIGELLDTMNAVRFAVDGFEADDIIATLATRAEAAG
FEVLIVTGDRDSFQLVSDHVTVLYPTKGVSELTRFTPEKVQEKYGLTPSQYPDFAALRGD
PSDNLPGIPGVGEKTATKWINQFGSFAELVERADEVKGKVGQALRDHLEAVKLNRHLTEL
VRDVELPKSVGDLERAPYDRTALKGFLEVLEIRNPSLRERLLAVDPGAAEDEPPAPAAGV
ELDGSVLGAGELAPWLERHGAQPLGVATVAAWALGVGSVSEIALAAAGGEAAWFDTTQLD
EADERAFASWISDPDRPKVVHGAKEALRVFPEHGWDIRGITMDTALAAYLVKPGRRSFAL
DALSVEYLHRELAPAAADGQLAFGAEDEQAEADALMAQARAVLDLGEAFGGKLGEVGAGE
LLHDMELPTSLLLARMERAGISADRAHLEAMEQQFAGAVQQAVKEAHASVGHEFNLGSPK
QLQEVFFGELNLPKTKKTKTGYTTDADALAWLANQTDHELPVIMLRHREQARLRSTVEGL
IKTIAADGRIHTTFSQTVAATGRLSSTDPNLQNVPVRTDEGRAIRRGFVVGEGFESLMTA
DYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTVASQVFGVERSAVDAEMRRKIKAMSYGL
AYGLSAFGLSQQLNIEAAEARALMDTYFERFGGVRDYLRRVVDEARATGYTATMFGRRRY
LPDLNSDNRQRREAAERMALNAPIQGTAADIVKMAMLRVDAALREAGLTSRMLLQVHDEI
VLEIAPGERERVEELVRREMSAAAELRAPLDVSVGVGPDWESAAH
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcactcgctggcgtaccgggcgttcttcgcgctgccggcggagaacttcacg
accgccggcggccagacgacgaacgcgatctacggcttcgcgtcgatgctggcgaacacg
ctccgcgacgaggcgcccacgcacttcgccgtggccttcgacgtgtcccgcaagacctgg
cgctcccaggacttccccgagtacaaggccaaccgttcctcgaccccggacgagttcaag
ggccaggtcgagctgatcggcgaactgctcgacacgatgaacgcggtgcgcttcgccgtg
gacggcttcgaggcggacgacatcatcgcgaccctcgccacccgggccgaggccgccgga
ttcgaggtcctgatcgtcaccggcgaccgggactccttccagctggtgtccgaccacgtc
accgtgctctacccgaccaagggcgtctccgagctgacccgcttcaccccggagaaggtc
caggagaagtacggcctgaccccctcccagtacccggacttcgccgccctccggggcgac
ccgtccgacaacctcccgggcatccccggggtcggcgagaagaccgccacgaagtggatc
aaccagttcggctcgttcgcggagctcgtggagcgcgccgacgaggtcaagggcaaggtc
ggccaggcgctccgggaccatctggaggccgtcaagctcaaccgtcacctgacggaactg
gtccgtgacgtggagctgccgaagtccgtcggcgacctcgagcgcgcgccctacgacagg
accgcgctgaagggcttcctggaggtcctggagatccgcaacccgagcctgcgcgagcgc
ctgctcgccgtcgacccgggcgccgccgaggacgagcccccggccccggccgccggcgtg
gaactcgacggcagcgtgctcggcgcgggtgaactggccccctggctggagcggcacggt
gcccagcccctcggtgtcgccacggtcgccgcctgggcgctgggcgtcggcagcgtcagc
gagatcgcgctggcggccgccgggggagaagccgcctggttcgacacgacccagctcgac
gaggccgacgagcgtgccttcgcctcctggatctccgacccggaccgtcccaaggtcgtg
cacggcgccaaggaggcactgcgggtgttccccgagcacggctgggacatccggggcatc
acgatggacacggccctggccgcctacctggtgaagcccggccgccggtccttcgcgctg
gacgccctctccgtcgagtacctccaccgcgagctggcgcccgccgccgccgacgggcag
ctggccttcggcgccgaggacgagcaggccgaggccgacgcgctgatggcgcaggcccgg
gcggtcctcgacctgggcgaggccttcggcgggaagctcggggaggtcggcgccggcgag
ctgctgcacgacatggaactgcccacgtcgctgctgctggccaggatggagcgggccggc
atctccgccgaccgggcccacctcgaggccatggagcagcagttcgcgggagccgtgcag
caggccgtgaaggaggcccacgcctccgtgggccacgagttcaacctcggctctcccaag
cagctccaggaggtcttcttcggcgagctcaacctgcccaagaccaagaagaccaagacc
ggttacacgaccgacgccgacgcgctggcctggctcgcgaaccagaccgaccacgagctg
cccgtcatcatgctccgccaccgcgagcaggccaggctgcgctccaccgtcgagggcctg
atcaagaccatcgccgcggacggccggatccacaccaccttcagccagaccgtcgccgcg
accggacggctctcctccaccgacccgaacctgcagaacgtgccggtgcgcacggacgag
ggccgggcgatccgccgcggcttcgtcgtcggcgagggcttcgagtcgctgatgacggcc
gactacagccagatcgaactgcgcgtcatggcccacctctcggaggacgagggcctcatc
gaggcgttcacctcgggcgaggacctgcacacgaccgtggcctcccaggtcttcggcgtg
gaacggtccgcggtcgacgcggagatgcgccgcaagatcaaggcgatgtcgtacggactg
gcctacggcctctccgcgttcggcctcagccagcagctgaacatcgaggccgccgaggcg
cgggccctgatggacacctacttcgagcggttcggcggcgtccgcgactatctgcgccgc
gtcgtggacgaggcgcgggccacggggtacacggcgacgatgttcggccgccggcgctac
ctcccggacctcaacagcgacaaccgccagcgccgcgaggcggccgagcgcatggcgctg
aacgcgccgatccagggcacggctgcggacatcgtcaagatggcgatgctgcgggtggac
gcagcgctgcgggaggcgggcctcacctcgcggatgctgctccaggtccacgacgaaatc
gttctcgagatcgccccgggcgagcgcgagcgggtcgaggagctcgtgcgccgtgagatg
tcggcggcggctgaactgcgcgcaccgctcgacgtctcggtgggtgtgggcccggactgg
gagtccgccgcgcactga
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