Streptomyces chengbuensis: QRN89_08540
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Entry
QRN89_08540 CDS
T10474
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03030
DNA replication
sche03430
Mismatch repair
sche03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QRN89_08540 (dnaE)
03430 Mismatch repair
QRN89_08540 (dnaE)
03440 Homologous recombination
QRN89_08540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sche03032
]
QRN89_08540 (dnaE)
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_08540 (dnaE)
Enzymes [BR:
sche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QRN89_08540 (dnaE)
DNA replication proteins [BR:
sche03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QRN89_08540 (dnaE)
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QRN89_08540 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
WJY49854
LinkDB
All DBs
Position
complement(1908250..1911789)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GVTPIIGIEAYVAPESRRNKRKILWGQPHQKRDDVSGSGGYTHKTIWAANATGLHNLFRL
SSDAYAEGWLQKWPRMDKETISKWSEGLIASTGCPSGELQTRLRLGQFDEALKSASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYSHEAGAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAEQVDTTGMFEKRD
LMPKFDIPEGYTEVSWFREETMRGMERRFPGGIPEDRLKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYALGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIPLSGILDPQHPRYSEAGEIRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGARKNGYSDQAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
EPNFAAQGDDVILFGLTAVRNVGQNVVESIIKSRKAKGKYTSFPDFLDKVEAVVCNKRTI
ESLIKAGAFDEMGHTRKGLVAQHEPMIDNVVAVKRKEAEGQFDLFGGMGDETSSEPGFGL
DVEFSDVEWEKSYLLAQEREMLGLYVSDHPLFGIEHVLSDKTDAAIAQLTGGEHSDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDVPRLVAMELMVPDLSSAGTNAPVVITIPTVKVTPPMVSRLGEILGHHKGNTEVRI
KLQGARKTTVLRLDRHRVQADPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcaccttcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaatgcctgcaacgagatgggcatgacgcacatcgcc
atgagcgatcacggcaacctccacggcgcgtacgacttcttccactccgcgcagaaggcc
ggagtcaccccgatcatcggcatcgaggcctatgtcgccccggagtcccggcggaacaag
cggaagatcctgtggggccagccgcaccagaagcgggacgacgtctccggttccggcggt
tacacccacaagacgatctgggcggcgaacgcgacgggactgcacaacctcttccgtctc
tcctcggacgcgtacgccgagggctggctccagaagtggccccggatggacaaggagacc
atctccaagtggtccgagggcctgatcgcctccacgggctgcccctcgggggagctccag
acccggctgcgcctcggtcagttcgacgaggccctgaagtcggcgtccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgcgtccgcgacgggctgctggagatcggcaggaagctcggcatcccgccgctggtgacc
aacgactcgcactacacgtactcccacgaggccggcgcccacgacgcgctgctgtgcatc
cagaccggaaagaacctctcggacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtcgaccgacgagatgtacgccatcgactcgtcggacgcctggcaggagggctgc
cgcaacacgctgctggtcgccgagcaggtcgacacgaccgggatgttcgagaagcgcgac
ctgatgccgaagttcgacatccccgaggggtacacggaggtctcctggttccgcgaggag
accatgcgcggcatggagcgccgcttccccggcggcatccccgaggaccgcctcaagcag
gtcgagtacgagatggacaccatcatctcgatgggcttccccgggtacttcctcgtcgtc
gccgacttcatcatgtgggccaagaagcagggcatcgcggtgggccccggccgaggctcc
gcggccggctcgatcgtggcctacgccctgggcatcacggacctggacccgatcccgcac
ggtctgatcttcgagcgcttcctcaaccccgagcgcatctcgatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaccatcaaggccaagaacgcgatcaaggac
tccgcccgcgtgctcggctacccgtacgcgatgggcgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctctccggcatcctcgacccccagcacccgcgc
tacagcgaggccggcgagatccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgcccgcggtgtggagggcctggtccggcagatgggcgtccacgccgccggc
gtgatcatgtccagcgagaccatcaccgagcacgtccccgtgtgggtgaggcacaccgac
ggggtgaccatcacccagtgggactacccgagctgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaaggggatcgacatcgatctcctgagcctgccgctcgacgaccccacgacgttcgag
ctgctgcagcgcggcgacaccctcggagtgttccagttcgacggcggtcccatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtgtcggccctctac
cggccgggcccgatgggcatgaactcgcacacgaactacgccctccgcaagaacggccag
caggagatcaccccgatccacccggagctggaggagccgctcaaggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggc
tactccctcggcgaggccgacatcctccgccgtgtgatgggcaagaagaagcccgaggaa
ctggccaagaacttcacgatcttccaggcgggcgcgcggaagaacggctacagcgaccag
gccatccaggccctgtgggacgtgctggtccccttcgccggatacgccttcaacaaggcg
cactccgccgcctacggcctcgtctcgtactggacggcctacctcaaggccaaccacccc
gccgagtacatggcggcgctgctcacctcggtcaaggacgacaaggacaagtccgccgtc
tatctgaacgagtgccgccgcatgggcatcaaggtcctgccgcccaatgtgaacgagtcg
gagccgaacttcgcggcccagggcgacgacgtgatcctcttcggcctcacggccgtccgg
aacgtcgggcagaacgtcgtggaatcgatcatcaagtcccgcaaggccaaggggaagtac
acgtcgttcccggacttcctggacaaggtcgaggcggtcgtctgcaacaagcggaccatc
gagtcgctcatcaaggccggtgccttcgacgagatgggccacacccgcaagggcctggtc
gcccagcacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcgggggcatgggcgacgagacgagcagcgagccgggcttcgggctc
gacgtcgagttctccgacgtggagtgggagaagtcgtacctgctcgcgcaggagcgcgag
atgctcggactgtacgtctccgaccacccgctcttcggtatcgagcacgtactgagcgac
aagaccgacgccgccatcgcgcagctgaccggcggggagcactcggacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcggaagatgacgaagcagggcaacgcctgg
gcgatcgccaccgtggaggacctggccggctccatcgagtgcatgttcttcccggcgacg
taccagctggtgtccacccagctcgtcgaggacacggtcgtcttcgtgaagggccgcctc
gacaagcgcgaggacgtcccgcggctcgtcgccatggagctgatggtcccggacctgtcc
tctgcgggcaccaacgcgcccgtggtgatcaccattccgacggtgaaggtcaccccgccc
atggtcagccggctcggcgagatcctcggtcaccacaagggcaacacggaggtgcggatc
aagctccagggcgcccgcaagaccaccgtgctgcgtctcgaccggcaccgggtccaggcc
gatcccgcgctgttcggcgacctcaaggtgctgctcggcccgtcctgcctggcgggctga
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