Streptomyces chengbuensis: QRN89_08815
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Entry
QRN89_08815 CDS
T10474
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QRN89_08815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_08815
Enzymes [BR:
sche01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
QRN89_08815
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QRN89_08815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF7387
Motif
Other DBs
NCBI-ProteinID:
WJY49903
LinkDB
All DBs
Position
1976185..1977048
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AA seq
287 aa
AA seq
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MHNPVGAHVPVAGGLARTGLAYAREIEAEAVQVFVANPRGWATPAGNPAQDELFRTGSAT
AGIPAYVHAPYLINFGSHSAVTAERSVESLRHSLRRGRDIGAAGVVVHTGSATGGRTRET
ALAQVRELVLPLLDELTHDDDPFLLLEPTAGQGFSLCSLVEDLGPYFEALDAHPRLGVCL
DTCHAFAAGHDLAAPGGAGRMLDVLVATVGPGRLRLFHANDSKDVVGARKDRHENIGAGH
IGEDAFRELMLHPAAEGVPLIIETPGGRHGKETYAADVALLKKLRDG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaaccctgtcggcgcccatgtgcccgtggccggcggcctggcccggacgggtctg
gcctacgcccgggagatcgaggccgaggccgtccaggtcttcgtcgccaatccgcggggc
tgggccaccccggcgggcaaccccgcgcaggacgagctgttccgtaccgggagcgcgacc
gccggcataccggcgtacgtgcacgccccgtacctgatcaacttcggctcccacagcgcg
gtcaccgccgagcggtccgtggagtcgctgcgccactcactgcgccggggccgggacatc
ggcgcggcgggtgtggtggtgcacacgggatcggcgaccgggggcaggacccgggagacg
gccctcgcgcaggtgcgggagctggtgctgccgctgctggacgagctgacgcacgacgac
gacccgttcctgctgctggagccgacggccgggcaggggttctccctctgctcgctggtc
gaggacctcggcccgtacttcgaggccctggacgcccacccccggctgggcgtctgcctg
gacacctgccacgcgttcgccgccggtcacgacctcgccgcaccgggcggagccggacgg
atgctggacgtgctcgtcgccacggtcggcccgggccggctgcgactgttccacgccaac
gactccaaggacgtcgtcggggcgcgcaaggaccgtcacgagaacatcggcgccggccac
atcggcgaggacgcgttccgcgagctgatgctgcaccccgcggcggaaggtgtgccgctg
atcatcgagacccccggcggccggcacggcaaggagacgtacgcggccgacgtggcactg
ctgaagaagctgcgcgacggctga
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