Streptomyces chengbuensis: QRN89_08905
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Entry
QRN89_08905 CDS
T10474
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sche Streptomyces chengbuensis
Pathway
sche00061
Fatty acid biosynthesis
sche00071
Fatty acid degradation
sche01100
Metabolic pathways
sche01212
Fatty acid metabolism
sche02024
Quorum sensing
sche04146
Peroxisome
Module
sche_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
QRN89_08905
00071 Fatty acid degradation
QRN89_08905
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
QRN89_08905
09145 Cellular community - prokaryotes
02024 Quorum sensing
QRN89_08905
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sche01004
]
QRN89_08905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sche04147
]
QRN89_08905
Enzymes [BR:
sche01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
QRN89_08905
Lipid biosynthesis proteins [BR:
sche01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
QRN89_08905
Exosome [BR:
sche04147
]
Exosomal proteins
Exosomal proteins of breast milk
QRN89_08905
Exosomal proteins of breast cancer cells
QRN89_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
WJY49920
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Position
1994042..1995838
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AA seq
598 aa
AA seq
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MREFSLPALYEVPTDGNLTDLIRRNATQHPDVAVMGRKVAGAWTDVTATQFLAEVRAAAK
GLIAAGVQPGDRVALMSRTRYEWVQLDFAIWSAGGVTVPVYETSSPEQVQWILGDSGAVA
VIVESEAHAAAIESVRATLPALRHVWQIEAGAVAQLTEAGAAVPDGTVDERSASAKADDP
ATIVYTSGTTGRPKGCVLTHRAFFAECGNLVERLKPLFRTGDSSVLLFLPAAHVFGRMVE
VASVMAPIKLGCVPDIKNLTDELASFRPTLILGVPRVFEKVYNSARAKAQADGKGKIFDK
AATTAIEYSRAIGTPEGAPLGLKIKHKVFDKLVFSKLRAVLGGRGEFAVSGGAPLGERLG
HFFRGIGFTVLEGYGLTETCAATAFNPWDRQKIGTVGQPLPGSVVRIADDGEVLLHGEHI
FTGYWNNEAATAEALADGWFHTGDIGTLDEDGYLAITGRKKEILVTAGGKNVAPAVIEDR
IRAHALVAECMVVGDGRPFVGALVTIDEEFLARWVSDNGKPAGSTAASLREDAELLAEIQ
RAVDEGNAAVSKAESVRKFRVLSSQFTEEAGHITPSLKLKRNVVAKDFADEIEAIYRA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgagttcagccttccggccctgtacgaggtcccgacggacggcaatctgacggat
ctcatccgccgcaacgcgacgcagcaccccgacgtcgcggtcatgggcagaaaggtcgcc
ggggcctggacggacgtcaccgccacccagttcctcgccgaggtgcgggccgccgcgaag
ggcctgatcgccgccggcgtgcagcccggggaccgggtcgccctgatgtcgcgcacccgc
tacgagtgggtgcagctcgacttcgcgatctggagcgccggcggtgtcaccgtcccggtg
tacgagacgagctcgccggagcaggtgcagtggatcctcggtgactccggggccgtcgcg
gtgatcgtcgagagcgaggcgcacgccgccgcgatcgagtccgtgcgcgccaccctgccg
gcgctgcggcacgtctggcagatcgaggccggcgcggtcgcgcagctcaccgaggccggg
gccgctgtccccgacgggacggtcgacgagcgcagtgcctccgccaaggccgacgacccg
gcgaccatcgtctacacctcgggcaccacgggccgccccaagggctgtgtgctgacgcac
cgggccttcttcgcggagtgcggcaacctggtggagcgcctgaagccgctgttccgtacc
ggcgacagctcggtcctgctcttcctccccgccgcgcacgtcttcgggcgcatggtcgag
gtcgcctcggtgatggcgcccatcaagctcggctgcgtaccggacatcaagaacctcacc
gacgagctcgcctcgttccgcccgacgctgatcctcggtgtgccgcgcgtgttcgagaag
gtctacaactcggctcgggccaaggcacaggcggacggcaagggcaagatcttcgacaag
gccgcgacgacggcgatcgagtacagccgcgcgatcggcacgccggaaggcgctccgctc
gggctgaagatcaagcacaaggtgttcgacaagctcgtcttcagcaagctgcgtgcggtg
ctcggcgggcgcggcgagttcgcggtctccggcggcgccccgctgggcgagcggctcggc
cacttcttccgcggcatcggcttcacggtgctggagggctacggcctcacggagacctgc
gcggcgacggcgttcaacccctgggaccggcagaagatcggcacggtcggacagccgctg
ccgggttcggtggtgcggatcgccgacgacggcgaggtgctgctgcacggcgagcacatc
ttcacgggctactggaacaacgaggccgcgacggctgaggccctggccgacggctggttc
cacaccggtgacatcggcaccctggacgaggacggctacctcgcgatcacgggccggaag
aaggagatcctggtgacggcgggcggcaagaacgtcgcccccgcggtcatcgaggaccgc
atccgtgcgcacgcgctggtcgcggagtgcatggtggtgggcgacggccggccgttcgtg
ggcgcgctggtcaccatcgacgaggagttcctggcccgctgggtctccgacaacggcaag
ccggccggttcgacggctgcctcgctgcgcgaggacgcggagctgctggcggagatccag
cgggcggtggacgagggcaatgccgcggtttccaaggctgaatcggtgcggaaattcagg
gttctcagctcccagttcaccgaggaggccggtcacatcacgccgtcgctgaagctcaag
cggaacgtggtggccaaggacttcgcggacgagatcgaggcgatctaccgggcgtag
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