Streptomyces chengbuensis: QRN89_20635
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Entry
QRN89_20635 CDS
T10474
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QRN89_20635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sche03021
]
QRN89_20635
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_20635
Enzymes [BR:
sche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QRN89_20635
Transcription machinery [BR:
sche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QRN89_20635
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QRN89_20635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
WJY51987
LinkDB
All DBs
Position
4642616..4646527
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHISVERQQIENRRDADLEARAKKLEAD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVRGE
GRAFNSTAEAIMAFDARELSLQAKIDIRFPIGTVPPRGWTPPVAEEGDDSGAAEWQQGDS
FRLTTTLGRALFNELLPEDYPFVDYTVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGF
YWATRSGVTVAISDVVVPEAKKEIVAGYEAQDEKVQKQYERGLITKDERTQELIAIWTKA
TNEVAEAMNENFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFR
EGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLRI
AERGADGVLRKAEDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVAAGVEEVKT
RSVLTCESAVGTCAYCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAG
DDITQGLPRVVELFEARTPKGVAPISEVAGIVRVEETEKTKKIVITPDDGSDEAAYPISK
RAKLLVRDGDHVEVGQKLTFGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKH
IEIIIRQMLRRVTIIESGDAELLPGELVERSKFEHENRRVVQEGGHPASGRPQLMGITKA
SLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLARYRNIRVE
PTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctggccaccgctgacgacatc
cgtcagtggtcccacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtcctacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacacgcgccaaggtgcgccgcgagcggatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggcgttccgtcgcggctgggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgccgcgtacatgatcacgtacgtggac
gaggagcgccgcacgcgcgacctgccctcgctcgaggcccacatctccgtcgagcggcag
cagatcgagaaccgccgcgacgccgacctggaggcccgcgccaagaagctcgaggccgac
ctggccgagctcgaggccgagggtgccaaggccgatgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgggaccgtgcccagcgcgagatcgaccgtctcgac
gaggtgtggacccggttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gccttcctgcagaccagcaacagccccaagggcatggtgctggactgcgtcccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgggtcatcaaccggaacaaccgtctgaagcgtctgctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccggcccgggcaaccgcccgctgaag
tccctcagcgacatgctgaagggcaagcagggccgcttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtcccgtcaccatgccgacccaggac
atggtgctgggcctcttcttcctcaccacggacgaggaggagcgcgaggtgcgcggcgag
ggccgtgcgttcaactccaccgccgaggcgatcatggcgttcgacgcccgggagctctcg
ctccaggcgaagatcgacatccgcttcccgatcggcaccgtcccgccgcgtggctggacc
ccgccggtggcggaggagggcgacgactcgggtgccgcggagtggcagcagggcgacagc
ttccggctgacgaccaccctgggccgcgcgctcttcaacgagctgctgcccgaggactac
ccgttcgtcgactacacggtcggcaagaagcagctctccgagatcgtcaacgacctcgcc
gagcgctacccgaaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttc
tactgggcgacccgttccggtgtcaccgtggccatctccgacgtcgtcgttcccgaggcg
aagaaggagatcgtcgcgggctacgaggcgcaggacgagaaggtccagaagcagtacgag
cgcggtctgatcaccaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcg
accaacgaggtcgccgaggcgatgaacgagaacttcccgaagaccaaccccatcttcatg
atggtcaactcgggtgctcgcggaaacatgatgcagatgcgtcagatcgccggtatgcgc
ggtctggtgtcgaacgccaagaacgagacgatcccgcgtccgatcaaggcgtccttccgt
gagggtctctccgtgctggagtacttcatctccacgcacggtgcccgtaagggtctcgcc
gacaccgccctgcgtacggccgactcgggttacctgacccgtcgtctggtcgacgtctcg
caggacgtcatcatccgcgaggaggactgcggcaccgaccgcggtctgaagctgcggatc
gccgagcggggcgccgacggtgtcctgcgcaaggcggaggacgtcgagacgtcggtgtac
gcgcggatgctcgcagaggacgtcgtcgtggacggcaaggtcatcgcgccggccaacgtc
gacctcggtgacgtgctgatcgacgcgctcgtcgcggcgggcgtcgaggaggtcaagacc
cgctcggtcctgacctgtgagtccgcggtcggtacgtgcgcgtactgctacggccgttcg
ctcgccaccggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtcc
atcggcgagcccggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggt
gacgacatcacccagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaag
ggtgtcgccccgatctccgaggtcgccggcatcgtccgggtcgaggagaccgagaagacc
aagaagatcgtcatcaccccggacgacggcagcgacgaggcggcctacccgatctcgaag
cgcgccaagctcctggtgcgggacggcgaccacgtggaggtgggccagaagctcaccttc
ggtgccaccaacccgcacgacgtgctgcggatcctcggccagcgcgctgtccaggtccac
ctggtcggcgaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcac
atcgagatcatcatccggcagatgctgcgccgtgtgacgatcatcgagtccggcgacgcg
gagctgctgccgggcgagctggtcgagcgctcgaagttcgagcacgagaaccgtcgtgtg
gtccaggaaggcggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcc
tcgctggcgaccgagtcgtggctgtcggcggcgtccttccaggagacgaccagggtcctc
accgacgcggcgatcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatc
atcggtaagctcatcccggccggtacgggcctcgcccgctaccgcaacatccgggtcgag
ccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgactac
tcgccgttcggcaccggctccggccaggccgttccgctggaggactacgactacggtccg
tacaaccagtaa
DBGET
integrated database retrieval system
