Streptomyces chengbuensis: QRN89_20820
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Entry
QRN89_20820 CDS
T10474
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QRN89_20820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sche03021
]
QRN89_20820
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_20820
Enzymes [BR:
sche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QRN89_20820
Transcription machinery [BR:
sche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QRN89_20820
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QRN89_20820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WJY52023
LinkDB
All DBs
Position
4673841..4674863
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgctgaccgaagaggtcgtcgacgagtaccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgt
acgctcctctcctcgatcccgggcgcggccgtcacgtccatccggatcgacggcgtcctg
cacgagttcaccaccgtgccgggtgtcaaggaggacgtcaccgacctcatcctgaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtccacaac
cccgacctggtcctggccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtgggccaggagatcggc
cggatcccggtcgactccatctactcgccggtgctgaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtcggccggaaagaccctggtcgagctgttcggc
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggtccgtccccgacggac
gccgccctggccgccgacctggcgctgccgatcgaggagctggagctcacggtccgctcc
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctcctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
tag
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