Streptomyces chengbuensis: QRN89_20980
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Entry
QRN89_20980 CDS
T10474
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QRN89_20980 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sche03019
]
QRN89_20980 (groL)
03110 Chaperones and folding catalysts [BR:
sche03110
]
QRN89_20980 (groL)
03029 Mitochondrial biogenesis [BR:
sche03029
]
QRN89_20980 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sche04147
]
QRN89_20980 (groL)
Enzymes [BR:
sche01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
QRN89_20980 (groL)
Messenger RNA biogenesis [BR:
sche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QRN89_20980 (groL)
Chaperones and folding catalysts [BR:
sche03110
]
Heat shock proteins
HSP60 / Chaperonin
QRN89_20980 (groL)
Mitochondrial biogenesis [BR:
sche03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
QRN89_20980 (groL)
Exosome [BR:
sche04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QRN89_20980 (groL)
Exosomal proteins of other body fluids (saliva and urine)
QRN89_20980 (groL)
Exosomal proteins of breast cancer cells
QRN89_20980 (groL)
Exosomal proteins of colorectal cancer cells
QRN89_20980 (groL)
Exosomal proteins of bladder cancer cells
QRN89_20980 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
Motif
Other DBs
NCBI-ProteinID:
WJY52051
LinkDB
All DBs
Position
4702892..4704514
Genome browser
AA seq
540 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDELIATARPIEEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILINQGKISSIQDLLPLLEKVIQ
AGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGATV
IAEEVGLKLDQAGLDVLGSARRVTVTKDDTTIVDGGGSSADVAGRVNQIKAEIEATDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLDGNLGKDGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITAKVAELEKGNGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADAGHGHGHAH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagctcgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtgatcgac
aagaagttcggtgcccccaccatcaccaacgacggtgtcacgatcgcccgtgaggtcgag
atcgaggacccgtacgagaacctcggtgcccagctggtgaaggaggtggcgacgaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctggcccaggcgctggtgcgc
gagggactgcgcaacgtcgccgccggtgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgacgagctgatcgccaccgcgcgcccgatcgaggagaag
tccgacatcgccgccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggcgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggttacctgtcgccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
aaccagggcaagatctcctcgatccaggacctgctcccgctgctggagaaggtcatccag
gccggcgcctcgaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcc
accctcgtcgtgaacaagatccgcggcaccttcaacgcggtcgcggtcaaggcccccggc
ttcggtgaccgccgcaaggcgatgctccaggacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggctccgcc
cgccgcgtcaccgtcaccaaggacgacaccacgatcgtcgacggcggcggcagcagcgcg
gacgtggccggccgcgtcaaccagatcaaggccgagatcgaggccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccctggtc
cacgccgtcaaggtgctggacggcaacctcggcaaggacggcgacgaggccaccggtgtc
gcggtcgtgcgccgtgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcaccgcgaaggtggcggagctggagaagggcaacggcttcaacgcc
gcgaccggcgagtacggcgacctggtgaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcgtcgatcgcctccctgctgctcaccaccgagaccctc
gtggtggagaagaaggaggaggagccggcggacgcgggccacggccacggccacgcccac
tga
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