Streptomyces chengbuensis: QRN89_22825
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Entry
QRN89_22825 CDS
T10474
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03420
Nucleotide excision repair
sche03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QRN89_22825
03430 Mismatch repair
QRN89_22825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_22825
Enzymes [BR:
sche01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRN89_22825
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QRN89_22825
MMR (mismatch excision repair)
Other MMR factors
QRN89_22825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WJY52390
LinkDB
All DBs
Position
5135648..5139853
Genome browser
AA seq
1401 aa
AA seq
DB search
MSARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRTALVRAGVTDPDVIDPDDPPGEPSISTYHAFAGRLL
TDHGLRIGLEPTSRLLADATRHQLAARVLREAPGPYPALTRSFPTLVSDLLALDAELAEH
LVAPEALRAHDSALLSELESVKLGNADLRKVPEAAAARRELLDLVVRYREAKRSRDLLDF
GDQIALSARLALTRPEVGRILRDEFRVVLLDEYQDTSVAQRLLLAGLFGRGAAPDGPPGE
GAGHPVTAVGDPCQAIYGWRGASVANLDDFPEHFPYADGRPATRFSLSENRRSGGRLLDL
ANGLAEPLRARHEGVEALRPAPGAERDGSVRVALLSTHAEEIDWLADSIAHLVRTGKEPG
EIAVLCRTAGDFAAIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLV
RLLTGPRWRIGARDLALLGRRARLLVHRSGDDGGADADQRLAAAVEGTDPAEVVSLADAL
DTFLEQAGPDDGLPFSAEARVRFARLATELRDLRRSLADPLMDVLHRVLATTGLDVELSA
SPHALAARRRETLAGFLDVAASFASLDGEATLLAFLGFLRTAEQYEKGLDNALPGGENTV
KVLTAHKSKGLEWDVVAVPGLVADQFPSTRSRESWTSQAKVLPHALRGDAATLPGVTAWD
AKGLKAYKEEMKEHQHTEELRLGYVTFTRPRSLLLGSAHWWGPTQKRRRGPSAFLEALYD
HCAAGFGEIEAWAEEPEEDAENPALRAATAEQAWPLPLDPTATARRRAAADTVLAHLALM
TGTGTGAMAGPGRPPAVLDDGPPGSPGRHGFDLFDFEGTAPAGATGALPDDPSDEDLWPE
DLTEPDDEPWPDEPWPGEDGEDGEDAGVVPDEDDRAAGLLGADLALPGAPGRIAPAGAPG
EPHEPSAPESGRPASGAPGAPGDPASGDHESERPASGAPGAPGDPASGDHESERPASDES
AAPGAPAAPGSAAPVPGAPGEPHEPSAPAPGGLTPGGLTPGGLTPGGLTPGGLTPGGLTP
GGLTPGGLTPGGLAPGAPYDGDDPTARPRSLPHPRLPAQRAEPLTPEDARVIASWDRDLE
ALTGELRRARASVREVPLPASLSASQLLRLAADPDGFARELARPMPRPPQRAARRGTRFH
AWVEARFEELPLPMLGPDELPGGDPDDAVIEDERELAALKEAFERTPYADRVPYRLEAPV
QVSLAGRVIRGRIDAVYRDGTTGAFEIVDWKTGRGRDADPLQLAVYRLAWAEQHGLPPES
VGAAFVHVRTGEVVRPTALPDRAGLERILLDDRPASGGAPSGDGPARGGPSDAPRGDPPP
DGTGPRSVPDRAVGGTAPGAG
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcacgcatcaccgatcccgagcagctcaaggagctgctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgcgccgcaggtcatcgtggccggggcg
gggtccgggaagacgacggtgatggccgccagggtggtgtggctggtgggcacgggccag
gtcgcccccgagcaggtcctcgggctgaccttcaccaacaaggccgcgggcgagctcgcc
gagcgcgtccgcacggccctcgtccgggccggggtgaccgacccggacgtgatcgacccg
gacgatccgccgggcgaacccagcatctcgacgtaccacgccttcgccggacggctcctc
acggaccacggcctccgcatcggtctggagccgacctcccggctgctcgccgacgccacg
cgccaccagctcgccgcacgcgtgctgcgcgaggccccgggcccctaccccgcgctgacc
aggtccttccccaccctcgtcagcgacctgctcgcgctcgacgcggaactggccgagcac
ctcgttgccccggaggcactccgcgcgcacgactccgcgctcctgagcgaactggagagc
gtcaagctcggcaacgcggacctgcgcaaggtccccgaggcggcggccgcccgccgggag
ctgctcgacctcgtcgtgcgctaccgcgaggccaagcgctcccgggacctcctcgacttc
ggcgaccagatcgccctgtccgcacggctcgcgctcacccgccccgaggtcggccgcatc
ctgcgggacgagttccgggtggtcctgctggacgagtaccaggacacgtccgtggcccag
cgcctgctgctcgcgggcctgttcggcaggggtgccgccccagacggcccgcccggcgag
ggcgcgggccatcccgtgaccgcggtgggcgacccctgccaggcgatctacggctggcgc
ggtgcgtccgtcgccaacctcgacgacttccccgagcacttcccgtacgccgacggccgc
cccgccacccgcttctccctgagcgagaaccgacgcagcggcggccggctcctcgacctc
gcgaacggcctcgccgagccgctgcgcgcccgccacgagggcgtcgaggcgctgcggccc
gcgcccggggcggagcgggacggctccgtgcgggtcgcccttctgtccacccacgccgag
gagatcgactggctcgccgactcgatcgcccatctcgtccgcacgggcaaggagccgggc
gagatcgcggtgctgtgccgcacggcgggggacttcgcggcgatccagggcgcgctcgtc
gcccgggacgtccccgtggaggtcgtcggcctctccggtctgctgcacctgccggaggtc
gccgacctggtcgcggtgtgcgaggtgctccaggatccgggcgcgaacgcctcgctcgtc
cggctcctcaccgggccgcgctggcgcatcggcgcccgcgacctggccctgctcgggcgc
cgggcccgcctgctggtccaccgttccggcgacgacggcggcgcggacgccgaccagcgg
ctcgccgccgccgtcgagggcaccgacccggccgaggtggtctcgctcgccgacgccctc
gacaccttcctggaacaggccggaccggacgacggcctgccgttctccgccgaggcccgg
gtgcggttcgcccgcctcgccaccgaactgcgcgacctgcggcgctccctggccgacccg
ctgatggacgtcctccaccgcgttctggccaccaccggcctggacgtggaactctccgcc
tcgccccacgccctggccgcccgccgccgtgagaccctcgcgggcttcctcgacgtcgcg
gcgtccttcgcctcgctcgacggcgaggcgacgctgctggccttcctcggcttcctgcgg
acggccgagcagtacgagaagggcctcgacaacgcgctgcccggcggcgagaacaccgtg
aaggtgctcaccgcccacaagtccaaggggctggagtgggacgtcgtcgcggtccccggg
ctggtcgccgaccagttccccagcacccgctcccgtgagtcctggacctcccaggccaag
gtcctgccccatgcgctgcgcggcgacgccgcgaccctgccgggcgtcaccgcctgggac
gcgaagggcctcaaggcctacaaggaggagatgaaggagcaccagcacacggaggaactc
cggctgggctatgtgacgttcacccgccctcggtctttgctcctcggctcggcccactgg
tggggcccgacccagaagcgccgtcgcggcccgtcagcgttcctggaggcgctgtacgac
cactgcgccgcgggcttcggcgagatcgaggcgtgggccgaggaaccggaggaggacgca
gagaacccggcgctccgcgccgcgacggcggagcaggcgtggccgcttccgctggatccc
acggcgaccgcgcgccgccgggcggccgcggacacggtgctggcccatctggcgctgatg
accggcaccggcaccggcgccatggcgggtccgggccggcccccggccgtgctcgacgac
gggcctccgggatcgcccggacgccacgggttcgacctcttcgacttcgagggcactgcg
ccggccggagccaccggcgccctccctgacgacccgtccgacgaggacctctggcccgag
gacctcacggaacccgacgacgaaccgtggccggacgagccgtggcccggtgaggacggc
gaggacggcgaggacgccggcgtcgtgcccgacgaggacgacagggccgccggcctgctc
ggcgcggacctcgcactccccggagccccggggcgcatcgcgcccgccggggcgcccgga
gagccccacgagccttcggcccccgaatccggaaggcccgcgtccggcgcgcccggagcc
cccggcgaccccgcgtccggcgaccacgagtcggaaaggcccgcgtccggcgcgcccgga
gcccccggcgaccccgcgtccggcgaccacgagtcggaaaggcccgcatccgacgagtcg
gcggcccccggcgcccccgcagcccccggctccgccgcccccgttcccggggcgcccgga
gagccccatgagccttcggctcccgcgcccggcgggctcacgcccggcgggctcacgccc
ggcgggctcacgcccggcgggctcacgcccggcgggctcacgcccggcgggctcacgccc
ggcgggctcacgcccggcgggctcacgcccggcgggctcgcccccggcgccccgtacgac
ggcgacgaccccaccgcccgcccccgttccctgccccacccccggctgcccgctcagcgt
gccgagcccctcacgcccgaggacgcccgcgtcatcgcctcctgggaccgcgatctcgaa
gcgctcaccggcgagctccgccgggcccgcgcatccgtgcgcgaggtccccctgccggcg
tcgctgtcggcgtcgcagttgctgcggctggccgccgaccctgacggcttcgcccgggaa
ctggcgcgtcccatgccccgtccgccccagcgcgccgcccgtcggggcacccgcttccac
gcctgggtggaggcgcgcttcgaggaactgccgctgccgatgctcgggccggacgaactg
cccggcggcgacccggacgacgccgtcatcgaggacgagcgcgagctcgccgcgctcaag
gaggcgttcgagcgcacgccgtacgccgaccgtgtcccgtaccggctggaggcccccgta
caggtcagcctggcgggcagggtcatccggggccggatcgacgccgtgtaccgcgacggg
acgacgggtgccttcgagatcgtggactggaagaccggccgcggccgcgacgccgatccg
ctccagctcgccgtctaccgcctcgcctgggccgagcagcacggcctcccgcccgagtcc
gtcggcgcggcgttcgtccatgtccgcaccggagaggtcgtccgtcccaccgcgctgccc
gacagggccggcctcgagcggatcctcctggacgaccgcccggcgtccggcggggccccg
tccggcgacggtcccgcccgcgggggcccgtccgatgctccgcgcggagaccccccgccc
gacggcaccgggccccggtccgtccccgaccgggcggtcggcgggaccgcccccggcgcc
ggatag
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