Streptomyces chengbuensis: QRN89_25485
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Entry
QRN89_25485 CDS
T10474
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sche Streptomyces chengbuensis
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sche03016
]
QRN89_25485 (truB)
Enzymes [BR:
sche01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QRN89_25485 (truB)
Transfer RNA biogenesis [BR:
sche03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QRN89_25485 (truB)
Prokaryotic type
QRN89_25485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WJY52870
LinkDB
All DBs
Position
5746223..5747152
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AA seq
309 aa
AA seq
DB search
MSQHSNTAPAATGSVTPDGLVIVDKPAGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGV
LVLGVQKATKLLGHLALTEKEYLGTIRLGQDTVTDDAEGEVTSSTAASGISRDAVDAGVA
ELTGAIMQVPSKVSAIKIDGKRSYARVRGGEEFDIPARPVTVSQFTVHDVREAVAEDGTP
VTDLVVSVVCSSGTYVRALARDLGAGLGVGGHLTALRRTRVGPYKLDAARTLDQLQEELT
VMPIGEAAAAAFPRWDVDAKRARLLLNGVRLDMPEYGTQGPVAVFGPEERFLALVEQQRG
KAKSLAVFG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcacagcaacaccgccccggccgccaccgggagcgtgaccccggacggcctg
gtcatcgtcgacaagccggccggcttcacctcgcacgacgtcgtcgccaagatgcgcggc
atcgcccggacccgccgcgtcgggcacgcgggcacgctggacccgatggcgaccggcgtg
ctcgtcctgggtgtccagaaggcaacgaagctgctcggccatctggcactcaccgagaag
gagtacctcggcacgatccggctcggccaggacaccgtcaccgacgacgcggagggcgag
gtcacctcgtccaccgccgcctcgggcatctcccgggacgccgtcgacgcgggggtcgcg
gaactgaccggcgccatcatgcaggtgccgtcgaaggtcagcgccatcaagatcgacggc
aagcggtcctacgcgcgggtgcgcggcggtgaggagttcgacatccccgcccgtccggtg
accgtctcgcagttcaccgtccacgacgtccgcgaggccgtcgccgaggacggcaccccg
gtcaccgacctggtcgtctcggtggtctgctcctccggcacctacgtccgggccctcgcg
cgcgacctcggcgccgggctcggcgtcggcggacacctgaccgcgctgcgccgcacccgc
gtcgggccgtacaagctcgacgcggccaggacgctcgaccagctgcaggaggagctgacg
gtcatgccgatcggcgaggccgctgcggcggccttcccgcgctgggacgtcgacgcgaag
cgcgcccggctgctgctcaacggcgtacgcctcgacatgccggagtacggcacgcagggc
ccggtggccgtcttcgggcccgaggagcgtttcctggcgctggtcgaacagcaacggggc
aaggcgaagagcctcgcggtcttcggctga
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