Streptomyces chengbuensis: QRN89_25710
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Entry
QRN89_25710 CDS
T10474
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sche Streptomyces chengbuensis
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sche03009
]
QRN89_25710 (rimO)
Enzymes [BR:
sche01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QRN89_25710 (rimO)
Ribosome biogenesis [BR:
sche03009
]
Prokaryotic type
ribosomal protein modification factors
QRN89_25710 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
DUF3079
Motif
Other DBs
NCBI-ProteinID:
WJY52910
LinkDB
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Position
5814114..5815595
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AA seq
493 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
SGGIHASHTPRDRRKLLPISPADRQGADVALPGHAQAPAPEDVPADLPEGLAPASGPRAP
LRRRLDTSPVASVKLASGCDRRCSFCAIPSFRGSFVSRRPSDVLGETRWLAEQGVKEIML
VSENNTSYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTEKVAP
YFDLSFQHSAPGVLRAMRRFGDTERFLDLLETIRGKAPEAGVRSNFIVGFPGEEETDFAE
LERFLTEARLDAVGVFGYSDEEGTEAAGYERKLDQDVVDARLAHLSRLAEELTAQRAEER
IGETLHVLVESVDDEDGAVGRAAHQAPETDGQVVFTSAVGLAPGRMVEAKVVGTEGVDLM
ADVVSERREEAGR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcagcggacggctgggagctcgtcgaggaagccgcc
gacgcggatgtcgcggtcgtcaacacctgcggattcgtcgaggccgccaaaaaggactcc
gtcgacgccctgctcgaggccaacgacctcaaggaccacgggaggacccaggccgtcgtc
gcggtcggctgcatggccgagcggtacggcaaggacctcgccgaggccctgcccgaggcc
gacggcgtgctgggcttcgacgactacgccgacatctccgaccgcctccagaccatcctg
agcggcggcatccacgcctcccacaccccccgcgaccgccggaagctgctgccgatcagc
ccggcggaccggcagggcgccgacgtggccctccccgggcacgcccaggcgcccgccccc
gaggacgtgccggccgacctccccgagggtctggcgcccgcctccgggccgcgtgccccc
ctccgccgacggctcgacaccagcccggtcgcctcggtgaagctcgcctccggctgcgac
cggcgctgctcgttctgcgccatcccgtccttccgcggctccttcgtctcccggcggccg
agcgacgtgctgggagagacccgctggctcgccgagcagggcgtgaaggagatcatgctg
gtctccgagaacaacacctcgtacggcaaggacctgggcgacatccggctgctggagacg
ctgctgcccgagctcgcggccgtcgacggcatcgagcgggtcagggtgagctatctgcag
cccgccgagatgcgccccggactgatcgacgtcctgacgtccaccgagaaggtcgcgccc
tacttcgacctctcgttccagcacagcgcccccggtgtgctgcgcgccatgcggcgcttc
ggcgacaccgagcggttcctggacctgctggagaccatccgcggcaaggccccggaagcc
ggtgtgcggtccaatttcatcgtcggcttcccgggtgaggaggagacggacttcgccgag
ctggagcgcttcctcacggaggcgcgcctggacgccgtcggcgtcttcggctactcagac
gaggagggcaccgaggccgccgggtacgagcgcaagctcgaccaggacgtcgtcgacgcc
cgcctcgcgcatctgtcccggctcgccgaggagctgaccgcccagcgggccgaggagcgc
atcggggagaccctgcacgtcctcgtggagtccgtggacgacgaggacggtgccgtgggc
cgtgccgcgcaccaggcgcccgagaccgacggacaggtggtcttcacgagtgccgtcggc
ctggcacccggacgtatggtcgaagcgaaggtcgtcggtacggagggcgtcgatctcatg
gccgacgtggtttcggagcgtcgtgaggaggcgggcagatga
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