Streptomyces chengbuensis: QRN89_26000
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Entry
QRN89_26000 CDS
T10474
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QRN89_26000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sche03019
]
QRN89_26000
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_26000
Enzymes [BR:
sche01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QRN89_26000
Messenger RNA biogenesis [BR:
sche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QRN89_26000
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QRN89_26000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WJY52961
LinkDB
All DBs
Position
5883000..5885159
Genome browser
AA seq
719 aa
AA seq
DB search
MDTLELRAEADAILAELVGDPGGSARLREDQWQAVAALVEQRRRALVVQRTGWGKSAVYF
VATALLRRRGFGPTVIISPLLALMRNQVESASRAGIRARTINSANPEDWDTIHGEVERGE
TDVLLVSPERLNSVDFREQVLPKLATTTGLLVVDEAHCISDWGHDFRPDYRRLRAMLAEL
APGVPVLATTATANARVTADVAEQLGTGAGEALVLRGPLERESLRLGVVRLPDAAHRLAW
LAEHLDELPGSGIIYALTVAAAEEATAFLRQRGFKVDSYTGRTENADRLQAEADLQQNRV
KALVATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRGVEHADVLMLPGKEDEAI
WRYFADAAFPPEAQVRQTLAALADAGRPLSVPALEAVVDLRRTRLETMLKVLDVDGAVRR
VKGGWTSTGQPWVYDTERYAWVARQRAAEQQAMREYVSTSRCRMEFLRRQLDDEGAVPCG
RCDNCTGAWIDSAVSTEALTGAAKELDRPGVEVEPRRMWPTGMPALGVDLKGRIPAGEQC
STGRALGRLSDIGWGNRLRPLLAENAPDGPVPEDVLKAAVAVLADWARSPGGWAPNVPDA
SARPVGIVAVPSLSRPQLVDSLAQGIASIGRLPYLGTLTHARPDSAHPARRSNSAQRLKA
LSGTFAVSEDLAVSLAGSSGPVLLVDDYTDSGWTLAVAARLLRQAGSGQVLPMVLAAAG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctggagctccgtgccgaagccgatgccatcctcgctgagctggtcggtgac
ccgggcggctcggcgcggcttcgggaggatcagtggcaggcggtggcggccctggtggag
cagcgcaggcgggcactggtggtgcagcgcaccggctggggcaagtcggcggtgtacttc
gtggccaccgctctgctgcgtcgtcggggcttcggacccactgtgatcatctcgccgctg
ctggcgctgatgcgcaaccaggtcgagtcggcgtcgcgggcgggcatccgggcgcgcacg
atcaactcggccaatccggaggactgggacacgatccacggcgaggtcgagcgcggtgag
accgacgttctcctcgtgagtccggaacgcctcaattccgttgatttccgagagcaggta
cttcccaagctcgcgaccacgacgggcctgctcgtggtcgacgaggcgcactgcatctcc
gactggggccatgacttccgccccgactaccgcaggctgcgggccatgctcgccgagctt
gcccccggagtgccggtgctggccaccaccgcaaccgccaacgcgcgggtgacggcagat
gtggctgagcagctgggcaccggtgcaggcgaggccctggtgctgcgtggcccgctggag
agggagagcctccggctcggcgtggttcggttgccggacgcggcgcaccgcttggcctgg
ctcgccgagcacctggacgagctgccgggctcggggatcatctatgcgctgacggtcgct
gcggctgaggaggccaccgctttcctgcggcagcgcgggttcaaggtggactcgtacacg
ggccggacggagaacgccgaccggctccaggccgaggcggaccttcagcagaaccgggtg
aaggcgctggtggcgacgtccgcgctgggcatggggttcgacaagccggacctgggcttc
gtggtccacctcggagcgccgtcttctccgatcgcgtactaccagcaggtggggcgcgcc
ggtcgtggggtggagcacgccgatgtgctgatgctgccgggtaaggaggacgaggcgatc
tggcgctacttcgccgatgccgctttccctccggaggcccaggttcgccagaccctggcg
gctctcgccgatgcgggacgaccgctgtctgtgccggctctggaggcggtggtggatctc
cggcggacccggctggagaccatgctcaaggtgctggacgtggacggcgcggtgcgccgc
gtgaagggcggctggaccagcacgggacagccctgggtgtacgacacggagcgatacgcg
tgggtggctcggcagcgggcggccgagcagcaggccatgcgcgagtacgtgagcacctcc
cggtgtcggatggagttcctgcgccggcagttggacgacgagggagcggtcccgtgcggc
cggtgcgacaactgcaccggagcctggatcgactccgccgtctcgaccgaggcgctgacg
ggggccgcgaaggaactggaccgccccggtgtggaagttgagccgcgccgcatgtggccg
acggggatgcccgcactgggtgtcgacctcaaggggcgcatcccggccggcgagcagtgc
tccaccggccgtgccctcggacggctctccgacatcggctggggcaaccgactgcgcccg
ctgctggctgagaacgcccccgacggaccggtccccgaggacgtgctgaaggccgcggtg
gccgtcctcgccgactgggcgcgctcgccggggggctgggcgccgaatgtcccggacgcc
tccgcccggccggtggggatcgtcgctgtgccgtccctgtcccgcccgcaactcgtcgac
tccctcgctcagggaatcgcgtccatcggtcgcctcccctacctcggcaccctgacacac
gcccggccggacagcgctcacccggcccgccgcagcaactcggcccagcgcctcaaggcg
ctgtccggaaccttcgccgtctccgaggacctggccgtctccctggccggctcctccggc
cccgtcctgctcgtcgacgactacacggattccggctggaccctcgcggtcgccgcccgc
ctcctccgccaggcaggcagcggacaggtccttccgatggtcctcgctgcggcgggctga
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