KEGG   Streptomyces chengbuensis: QRN89_26025
Entry
QRN89_26025       CDS       T10474                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
sche  Streptomyces chengbuensis
Pathway
sche02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sche00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    QRN89_26025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sche03021]
    QRN89_26025
Transcription machinery [BR:sche03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     QRN89_26025
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 SR-25 CDC27
Other DBs
NCBI-ProteinID: WJY52966
LinkDB
Position
5892098..5893672
AA seq 524 aa
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRTRKSVAAKSPAKRTATKTVAAKTATAKTVAASAAASSAAAD
DDEITTAAAGETAAPAKKAAAKKTAARKTTAAKKTAAKKTAAKKTTAAKKDAEELLEGEE
VLEEPQAGKAGGDEPEGAESAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPL
LNAEQEVELAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVV
SLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQAR
TIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLH
TPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDG
QPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1575 nt   +upstreamnt  +downstreamnt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaatgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagtcgcccaagcgcacc
cgcaagagcgtcgcagctaagagcccggcaaagcgcaccgccaccaagaccgtcgcggcc
aagacggccacggccaagaccgtcgccgcctccgccgccgcgtcgtcggccgcggccgac
gacgacgagatcaccacggccgccgccggcgagaccgccgcgcccgcgaagaaggcggcg
gcgaagaagaccgcggccaggaagacgacggccgcgaagaagaccgccgcgaagaagacc
gcggccaagaagacgacggcggccaagaaggacgccgaggagctgctcgagggcgaggag
gtgctcgaggagccgcaggccggcaaggcgggcggcgacgagcccgagggcgccgagagc
gccggcttcgtgctgtccgacgaggacgaggacgacgcccccgcgcagcaggtcgccgcg
gccggcgccaccgccgacccggtgaaggactacctgaagcagatcggcaaggtccccctg
ctcaacgcggagcaggaggtcgaactggccaagcgcatcgaggcgggcctgttcgccgag
gacaagctggcgaactccgacaagctcgcccccaagctcaagcgcgagctggagatcatc
gccgaggacggccgccgcgccaagaaccacctgctggaggccaacctccgactggtcgtc
tcgctggccaagcgctacaccggccgcggcatgctcttcctggacctgatccaggagggc
aacctcggtctgatccgcgccgtcgagaagttcgactacaccaagggctacaagttctcc
acgtacgccacctggtggatccgtcaggcgatcacccgcgccatggccgaccaggcccgc
accatccgtatcccggtgcacatggtcgaggtcatcaacaagctcgcgcgcgtgcagcgc
cagatgctccaggacctgggccgtgagcccaccccggaggagctggccaaggagctcgac
atgaccccggagaaggtcatcgaggtccagaagtacggccgtgagccgatctcgctccac
acccccctgggtgaggacggcgacagcgagttcggcgacctgatcgaggactccgaggcc
gtcgtcccggccgacgccgtcagcttcacgctcctccaggagcagctgcactcggtgctc
gacacgctctcggagcgtgaggcgggcgtcgtctccatgcgcttcggtctcacggacggt
cagccgaagacgctcgacgagatcggcaaggtctacggcgtgacgcgtgagcggatccgc
cagatcgagtccaagacgatgtccaagctgcgccacccgtcccggtcccaggtcctgcgg
gactacctggactag

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