Streptomyces chengbuensis: QRN89_26025
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Entry
QRN89_26025 CDS
T10474
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sche Streptomyces chengbuensis
Pathway
sche02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QRN89_26025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sche03021
]
QRN89_26025
Transcription machinery [BR:
sche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QRN89_26025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
SR-25
CDC27
Motif
Other DBs
NCBI-ProteinID:
WJY52966
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Position
5892098..5893672
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AA seq
524 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRTRKSVAAKSPAKRTATKTVAAKTATAKTVAASAAASSAAAD
DDEITTAAAGETAAPAKKAAAKKTAARKTTAAKKTAAKKTAAKKTTAAKKDAEELLEGEE
VLEEPQAGKAGGDEPEGAESAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPL
LNAEQEVELAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVV
SLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQAR
TIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLH
TPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDG
QPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaatgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagtcgcccaagcgcacc
cgcaagagcgtcgcagctaagagcccggcaaagcgcaccgccaccaagaccgtcgcggcc
aagacggccacggccaagaccgtcgccgcctccgccgccgcgtcgtcggccgcggccgac
gacgacgagatcaccacggccgccgccggcgagaccgccgcgcccgcgaagaaggcggcg
gcgaagaagaccgcggccaggaagacgacggccgcgaagaagaccgccgcgaagaagacc
gcggccaagaagacgacggcggccaagaaggacgccgaggagctgctcgagggcgaggag
gtgctcgaggagccgcaggccggcaaggcgggcggcgacgagcccgagggcgccgagagc
gccggcttcgtgctgtccgacgaggacgaggacgacgcccccgcgcagcaggtcgccgcg
gccggcgccaccgccgacccggtgaaggactacctgaagcagatcggcaaggtccccctg
ctcaacgcggagcaggaggtcgaactggccaagcgcatcgaggcgggcctgttcgccgag
gacaagctggcgaactccgacaagctcgcccccaagctcaagcgcgagctggagatcatc
gccgaggacggccgccgcgccaagaaccacctgctggaggccaacctccgactggtcgtc
tcgctggccaagcgctacaccggccgcggcatgctcttcctggacctgatccaggagggc
aacctcggtctgatccgcgccgtcgagaagttcgactacaccaagggctacaagttctcc
acgtacgccacctggtggatccgtcaggcgatcacccgcgccatggccgaccaggcccgc
accatccgtatcccggtgcacatggtcgaggtcatcaacaagctcgcgcgcgtgcagcgc
cagatgctccaggacctgggccgtgagcccaccccggaggagctggccaaggagctcgac
atgaccccggagaaggtcatcgaggtccagaagtacggccgtgagccgatctcgctccac
acccccctgggtgaggacggcgacagcgagttcggcgacctgatcgaggactccgaggcc
gtcgtcccggccgacgccgtcagcttcacgctcctccaggagcagctgcactcggtgctc
gacacgctctcggagcgtgaggcgggcgtcgtctccatgcgcttcggtctcacggacggt
cagccgaagacgctcgacgagatcggcaaggtctacggcgtgacgcgtgagcggatccgc
cagatcgagtccaagacgatgtccaagctgcgccacccgtcccggtcccaggtcctgcgg
gactacctggactag
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