Streptomyces chengbuensis: QRN89_30005
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Entry
QRN89_30005 CDS
T10474
Name
(GenBank) DEAD/DEAH box helicase
Organism
sche Streptomyces chengbuensis
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Paralog
GFIT
Motif
Pfam:
DEAD
YjiV_N
Helicase_C
DUF5817
Kizuna_N
Motif
Other DBs
NCBI-ProteinID:
WJY53665
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Position
6859781..6865246
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AA seq
1821 aa
AA seq
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MSVEQQTATVTNTDVQDVMGTFDDLRSALFRYYDTPFGVDDRSVMEERRNLLDRDNGAWR
DPLIELRPQYASRGVGIADSFAEAGAHPEAAEFARFTLPDGVTSLYQHQHDALVAACSGQ
DFVVTAGTGSGKTESFLLPVLADLVAESAHWQGTRATQREWWQGDGNHVPSRQGEHGHPA
AMRVLVLYPTNALADDQLVRLRKSLDSREAHEWLDQKRNGHRFYFGRYTGATPVSGSRDS
EPANLRLRQYLREVQERQRKADERLDEGLRPFIPRLGGAEMHARWDMQAAPPDIMVTNYS
MLNIMLLRKREEHIFRATRKWLDETPDARVTLILDELHMYRGTAGTEVAYLLRNLRHRLG
LDKSPEKLRVLAASASLEAGRDDEFLDGFFALPGSRRVIIPGRSKEIHGEGDLAAHTERL
AHAAKAPLTQDQALALARETGLGPAVQRALTPGGKPRALPAPELAKNLFPDIPEEPRQDA
LHGVLRILGSAQDPELPQLRAHFFFRNIEGIWACTDPNCPQIPVEHGPERRVGRLFAEPT
SRCTCGARVLELLSCQACGDLMLGGYASPKDTQRRKFTGALHTDFPDLDLLPDEASGAPT
AANYVVYWPRTKGLGLDDPGWHAGLSDGGPQVEFEFRRSAYQPATGRLENRDVQHTGWSF
HISVPPDKEGKKPAHDPGRLQAFPTRCPACGDDWEIKYDRDGRFIPLESPDRLRNAPVRR
MRTGFYKINQVLVTEALGHLPDGKRKAIAFSDSRDDASELASGLALRHYQDLLRLLSAQA
VENQGDPFGDLRLVKAHYAGAPVDREAARGAMERLRDRDPADWGRLKAILADDLDAEPEL
LPDLERKFSALPSLDDLASDLEGMLLKYGTNPAGPAASLQQTSAEQPWTALYNWERDREA
VVETPAQEELLNRLRSRLRLEAIGSLFSGGGRDFESLGLGWLCLRDDRSPVEIGRDSDQA
VARASLRILGLMRRFTRIRASLQRPPAPLKRFWKQVAERQGSDVQTVEDRVLGVWKDAVV
DYVIKPEKVALRSGENKTWTCPSCHRPHLHPGAGVCTKCLTPLPVLPQQYSGVLEDDYYA
WKAAHRTGDFPLRTAELTGQTDRLEAQRRQSLFQDVFLGDKDVPRADGLELLSVTTTMEA
GVDIGPLNTVIMANMPPTRFNYQQRVGRAGRRNSPVALALTVCRGRSHDEHYFARPEAIT
NDPTPPPYLVLDMVSVFRRVLLGEVLRQAFEPLQPAERRKGPDMTTNVHGQFGLAADWPM
HRGAVRRWIAERPDRIRAAAAALQAGSPASVAAVNPVAAIDELLDQVDEVAARTVGHSDL
SQRLAEAGLLPMFGFPTRSRLLYRSIPQKTFPWPPADSVNRDLAVALSKFAPGSETPQDG
RLLRSRGVVSLVPSGRGVQAAEDPFGPEQLVAMCRICSHVDPQAVVDPDTGSAGTCPACG
AESKYYKAVPFREPAGFRAAREARDYDGYRELGSNATSARTATDLENTAPRVHRAADDWM
VVHTGSGDRYIVNTNAGKLFRFAKNAGPWGGYVALDHPKAEADLETALGATQHTDMLFIG
AKGALDTSRGLRFDISKSQQIDGFPEAYHGRRAAWYSLAALLRRAAAPHLDVQPEELLSG
IHGSDAPVAAPVMAYLADSLDNGAGFSTYLGSEEHIEEFLQAVDRYVHDLEAGHHAQNCR
SSCYTCLRDYSNMRLHPLYDWRLARDLTDALRGRKLQIDPDEHAVLLKGWANEEPNVSLK
ETASGPVALFTSDFTGEPVAIAVKHPLESADEKCGNERLQALRNEVRAGGLATRIAFADS
YSLDRTPAAVIEQVHIFAEEL
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgaacagcagacagcgacggtgacgaacaccgatgtccaggacgtcatgggc
acgttcgacgacctgcgcagcgcgctcttccgctactacgacaccccgttcggcgtcgat
gaccgttccgtcatggaggaacggcgcaacctcctggaccgggacaacggagcctggcgt
gacccgctgatcgaactgcggccgcagtacgcctcccggggcgtcggcatcgcggactcc
ttcgccgaagcaggggcgcacccggaggcggccgagttcgcccggttcaccctccccgac
ggtgtgaccagcctctaccagcatcagcacgacgccctggtcgccgcctgttcgggccag
gacttcgtggtcaccgcaggcaccggatccggcaagacggagtccttcctgctgccggtc
ctcgccgacctggtcgccgagtccgcccactggcagggcacccgtgcgacgcagcgggag
tggtggcagggggacggcaaccacgtgcccagccgacagggcgagcacggacatcccgca
gccatgcgtgtgctggttctctaccccaccaacgccctcgccgacgaccagctggtccgg
ctccggaagtcgctggacagccgagaggcccacgagtggctggaccagaagcgcaacgga
caccgcttctacttcggccggtacaccggagccactcctgtctccggcagccgcgattcc
gagccagcgaacctccgtctccgtcagtacctgcgggaggtccaggagcggcagcgcaag
gccgacgaaaggctcgacgaggggctgcggcccttcatcccgcgcctcggcggagcggag
atgcacgcccgctgggacatgcaggccgcaccgccggacatcatggtcaccaactactcg
atgctgaacatcatgctgctccgcaagcgggaggagcacatcttccgcgccacgaggaag
tggctggacgagaccccggacgcccgcgtcaccctgatcctggacgagctccacatgtac
cgcggcactgctggcaccgaggtggcctaccttctgcgcaacctccgccaccgtctcggc
ctcgacaagagccccgaaaagctgcgtgtgctcgccgcctccgcctccctggaggccggg
cgggacgacgagttcctcgacggattcttcgccctgcccggatcccggcgcgtgatcatc
cctggaaggtcgaaagagatccacggcgagggcgacctggccgcgcacaccgaacgcctc
gcgcatgccgcgaaggcccccctcacccaggaccaagccctcgccctggcccgggagacc
ggcctcggcccagcggtccagcgcgcactcactccaggcggcaagcctcgtgctctgccc
gcccccgaactcgcgaagaacctcttcccggacatccccgaggaaccgcgccaggacgct
ctccacggggtgctgcgcatactcggctccgcacaggaccccgaacttccccagctccgc
gcgcacttcttcttccggaacatcgagggcatctgggcctgcaccgacccgaactgcccg
cagattcccgtggagcacggcccggaacggcgggtcggccggcttttcgccgaacccacc
tcccgatgcacctgcggtgcccgcgtactggaacttctctcctgccaggcctgcggcgac
ctcatgctcggcgggtacgcgagccccaaggacacccagcggcgcaagttcaccggtgcc
ctccacaccgacttcccggatttggacctgctccccgacgaggccagtggggcacccacc
gcggcgaactacgtcgtgtactggccgcgtacgaagggcctcggcctcgacgaccccggc
tggcacgcgggcctgtccgacggcgggccgcaggtcgagttcgagttccgccgcagcgcc
taccagcccgccaccggccgcctggagaaccgggacgtccagcacaccggatggtcgttc
cacatctccgtacccccggacaaggaaggcaagaagccggcccacgacccgggccgcctg
caggcattccccacccgttgccccgcctgcggcgacgactgggagatcaagtacgaccgg
gacggccgtttcatcccgctggagtctcccgaccggctgcgcaacgcgccggtccggcga
atgcgcaccggcttctacaagatcaaccaggtgctggtgaccgaagccctcggccacctc
ccggacggcaagcgcaaggcgatcgccttctccgacagccgtgacgacgcctccgagctc
gccagcggcctcgctctgcgccactaccaggaccttctccgcctgctcagcgcccaggcc
gtcgagaaccagggcgatccgttcggagaccttcggctggtgaaggcccactacgccggg
gcgccggtcgatcgtgaagccgcccgtggcgccatggaacggctgcgggaccgcgatccg
gcggactgggggcgcctcaaggcgatcctcgccgacgacctcgacgcggaaccggaactc
ctgcccgacctggagcggaagttctccgcactgccctccctggacgacctggcctccgac
ctcgagggcatgctgctcaagtacggcaccaaccccgccggtcccgcggcctcgctccag
cagacctcggccgaacagccctggaccgcgctctacaactgggagcgggaccgggaagcg
gtggtggagaccccggcacaggaggaactcctcaaccgcctccgctcccgtctccgcctg
gaggccatcggaagcctcttctccggcggcggccgtgacttcgaatcgctcggactcggt
tggctctgcctgcgtgacgatcgctcgcctgtagagatcggccgggacagcgatcaggcc
gtggcgcgtgccagtctgcggatactcggcctgatgcggcgcttcacccggatacgtgcc
tctctgcagaggccgcctgcgcctctgaagcgtttctggaagcaggtcgccgaacgccag
ggttccgatgtgcagacggtcgaggaccgggtgctcggcgtctggaaggacgccgtggtc
gactacgtcatcaagccggagaaggtggcgctccgctccggcgagaacaagacctggaca
tgcccctcctgccaccggccgcaccttcacccgggcgcgggagtgtgcaccaagtgcctg
accccgctgcctgtcctgccccagcagtacagcggagtcctcgaggacgactactacgcc
tggaaggccgcgcaccgcaccggtgacttccccctgcgcacggcagagctgaccggtcag
acggaccggctggaggcccagcgccggcagagcctcttccaggacgtcttcctcggcgac
aaggacgttccgcgggcggacggcctggaactgctctccgtgaccacgaccatggaggcc
ggtgtcgacatcggcccgctcaacaccgtgatcatggccaacatgccgcccacccgcttc
aactaccagcagagggtggggcgtgcgggccgacgcaacagcccggtcgccctggccctc
accgtctgccgcggccgaagtcacgacgagcattacttcgcccgcccggaagccatcacc
aacgatccgactccaccgccctacctggtactcgacatggtctccgtcttccggcgggtc
ctgctgggagaggtcctgcgccaggccttcgagcccctgcagccggcggagcgccggaag
gggccggacatgacgaccaacgtgcacggacagttcggtctcgccgccgactggccgatg
catcgcggtgccgtccgccgctggatcgccgagcgcccggaccgcatcagagccgctgcc
gccgccctccaggccggatcaccggcgagcgtcgccgccgtgaatccggtggccgccatc
gacgaactcctcgaccaggtcgacgaggtggcagcccggacggtcggccactccgacctc
agtcagcgtctggccgaggcgggcctcctgcccatgttcggcttcccgacccgctcccgt
ctcctctaccggagcatcccgcagaagaccttcccctggccgccggccgactccgtcaac
cgggacctggccgtcgccctcagcaagttcgcaccgggcagcgaaaccccgcaggacggc
cgtctgctccgctccaggggagtggtctccctcgtcccgagcgggcgcggagtacaggcc
gccgaggacccgttcgggccggaacaactggtagccatgtgccggatctgctcccacgtg
gacccgcaggccgttgtcgacccggataccgggagcgccggtacctgccccgcctgcgga
gcggagagcaagtactacaaggccgtccccttccgtgagcccgcaggttttcgggccgcc
cgtgaagcacgggactacgacggctaccgggagctcggctccaacgccaccagcgcacgg
accgccaccgacctggagaacaccgccccgcgcgtccaccgcgccgccgacgactggatg
gtcgtccacaccggaagcggcgaccgctacatcgtcaacaccaatgccggaaagctcttc
cggttcgcaaagaacgccggtccatggggcggatacgtcgcgctggaccaccccaaggcg
gaagccgacctggagaccgccctcggcgccacccagcacaccgacatgctcttcatcggg
gccaagggcgccctcgacacgagccggggcctccgcttcgacatctcgaagtcccagcag
atcgacggcttccccgaggcctaccacggccggcgcgccgcctggtactcgctggcggcc
ctgctgcgccgcgccgccgccccgcacctggacgtgcagccggaggaactcctcagcggc
atccacggctcggacgccccggtggccgctcccgtcatggcctacctggcggacagcctc
gacaacggcgcaggcttcagcacctacctcggttcggaggaacacatcgaggagttcctc
caggcggtggaccggtacgtgcacgacctggaggccggacatcatgcgcagaactgccgc
agctcctgctacacctgcctgcgcgactactccaacatgcgcctccacccgctgtacgac
tggcggctcgcccgcgacctgaccgacgccctgcggggtcggaaactgcagatcgacccg
gacgagcacgccgtcttgctgaagggctgggcgaacgaggagcccaacgtcagcctcaag
gagaccgcctccggccccgtggcgctcttcacgtcggacttcaccggtgagcccgtcgcg
atcgccgtcaagcatccgctggagtccgcagacgagaagtgcgggaatgaacggctccag
gccctgcgcaacgaggtccgtgccggaggcctcgccaccaggatcgccttcgccgactcc
tacagcctggaccggactcctgccgcggtgatcgagcaggtgcacatcttcgcggaggag
ctctga
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