Streptomyces chengbuensis: QRN89_31690
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Entry
QRN89_31690 CDS
T10474
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sche Streptomyces chengbuensis
Pathway
sche03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QRN89_31690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sche03400
]
QRN89_31690
Enzymes [BR:
sche01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QRN89_31690
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QRN89_31690
DNA repair and recombination proteins [BR:
sche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QRN89_31690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WJY53966
LinkDB
All DBs
Position
7257765..7258628
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALRDFLDENLVGKEIARVMPVAISVLKTYDPPLGALDGSEVTSVRRHGKFLD
IGTGGGLHLLFHLARAGWLHWKDVLPSVVPRPGKGPLALRAALTGGDGFDLTEAGTTKRL
AVHLVHDPAEVAGVARLGPDPLADDFDRDAFAALLTGERRQIKGALRDQSLIAGIGNAYS
DEILHAARMSPYKLASRLGEEEITGLYEAMRTTLRDAVERSRGLAAGRLKAEKKSGLRVH
GRTGLPCPVCGDTIREVSFHDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtggaagcgctcagggacttcctcgacgagaacctggtcggc
aaggagatcgcccgggtgatgcccgtggcgatcagcgtgctcaagacgtacgaccctccg
ctcggcgccctcgacgggagcgaggtcacctccgtacggcgccacggcaagttcctcgac
atcggcaccggcggcggactgcacctcctcttccacctcgcccgggcggggtggctgcac
tggaaggacgtcctgccgtcggtagtgccccgtccgggcaagggccccctggccctgcgc
gccgcgctcaccggcggggacggcttcgacctgaccgaggcgggcacgacgaagcggctc
gccgtccatctcgtgcacgacccggccgaggtcgccggtgtcgcccggctcggacccgac
ccgctcgccgacgacttcgaccgcgacgccttcgccgcgctcctcaccggggagcgccgg
cagatcaagggggcgctgcgcgaccagagcctcatcgccggaatcggcaacgcctacagc
gacgagatcctgcacgccgcgaggatgtcgccgtacaagctcgcctcccgtctcggggag
gaagagatcaccggcctgtacgaggcgatgcgcacgacgctcagggacgccgtcgagcgc
tcgcggggcctggccgcgggccggctgaaagccgagaagaagagcgggctgagggtgcac
ggccgcaccggtctgccctgcccggtgtgcggcgacaccatccgcgaggtgtcgttccac
gactcgtcgctgcagtactgccccacgtgccagaccggcggcaaaccgctcgccgaccgg
aggctgtctcggctgctcaagtga
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