Streptomyces chromofuscus: IPT68_03655
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Entry
IPT68_03655 CDS
T07378
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
schf
Streptomyces chromofuscus
Pathway
schf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPT68_03655 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schf03021
]
IPT68_03655 (rho)
03019 Messenger RNA biogenesis [BR:
schf03019
]
IPT68_03655 (rho)
Transcription machinery [BR:
schf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IPT68_03655 (rho)
Messenger RNA biogenesis [BR:
schf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IPT68_03655 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
DUF3086
Spore_III_AA
NACHT
AAA_22
AAA
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QOV45094
UniProt:
A0A7M2TA32
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All DBs
Position
813438..814583
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AA seq
381 aa
AA seq
DB search
MTTTLEHPPVPQQAVAVQAVMGVLDIDAGGKGHLRGTDCLPSPADPQLPAALIRRYGLRR
GDLVEAVRGPRHSVSEVERVDGRAPGQLRGRRAFHELTPLHPRERLRLEHPAAGLTGRVA
DLISPVGKGQRGLIVAPPKTGKTVLLQQIAAAVAGNHPECRLMVVLLDERPEEVTDMRRS
VRGEVYASTFDRTPKQHIALAELVVERAKRLVEAGEDVVILLDSLTRLCRAHNNAAGAGG
RTLTGGVDAAALQGPKRFFGAARLAEEGGSLTILATALVETGSRADDFFFEELKSTGNME
LRLSRELASRRVFPAVDIAGSGTRREELLLTPAESTAVRGLRRALRTRDGESGLETLLER
MRQTPDNAAFLRRIQPTLPTG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccactctcgaacaccctcccgtcccgcagcaggccgtggccgtccaggccgtc
atgggcgtcctcgacatcgacgcgggcggcaagggacatctgcgcggcaccgactgcctg
ccctcgcccgccgacccgcagctgccggccgccctgatccgccggtacggactacgcagg
ggcgacctcgtcgaagccgtgcgcggcccccgtcacagcgtgagcgaggtcgagcgcgtg
gacggccgtgcgcccgggcagctccgcggccggcgcgccttccacgagctcacgcccctc
cacccccgcgagcggctccgcctcgaacacccggcggccggactcaccggacgcgtcgcc
gacctgatctccccggtcggcaaggggcagcgcgggctgatcgtggccccgccgaagacc
ggcaagaccgtactgctccagcagatcgccgccgccgtcgccggcaaccaccccgagtgc
cggctgatggtcgtgctgctcgacgagcgccccgaggaggtcaccgacatgcgacgctcg
gtgcggggcgaggtgtacgcctccaccttcgaccggacgcccaagcagcacatcgcgctc
gccgaactggtcgtcgagcgggccaaacggctcgtcgaggccggcgaggacgtcgtgatc
ctgctcgactcgctgacccggctgtgccgggcccacaacaacgcggcgggcgccggcggc
cgtacgctcaccggcggcgtcgacgccgccgcgctgcagggacccaagcggttcttcggc
gccgcgcgcctggccgaggagggcggttcgctgacgatcctcgccaccgccctggtggag
accggctcccgggccgacgacttcttcttcgaggagctcaagagcaccggcaacatggaa
ctccgcctcagccgcgaactcgcctcccgccgcgtcttcccggccgtcgacatcgccggc
tccggcacccgccgcgaggaactgctcctgacgccggccgagtcgaccgccgtacgggga
ctgcggcgggcgctgcggacccgcgacggcgagtccggtctggagacgctgctggagcgg
atgcggcagacccccgacaacgccgccttcctgcgccgcatccagcccacactgccgacc
ggatag
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