Streptomyces chromofuscus: IPT68_07215
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Entry
IPT68_07215 CDS
T07378
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
schf
Streptomyces chromofuscus
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schf03019
]
IPT68_07215
Enzymes [BR:
schf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IPT68_07215
Messenger RNA biogenesis [BR:
schf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IPT68_07215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QOV45709
UniProt:
A0A7M2TC34
LinkDB
All DBs
Position
complement(1593410..1596259)
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AA seq
949 aa
AA seq
DB search
MIVLLSVRPGTLESTMTEDLSPAERYAAARRRAAEQATALASFREMYDFGLDPFQIEACQ
ALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGRKCFYTTPIKALSNQKYNDLCRRYGSG
KVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDEVHYLSDRFRGAVWE
EVIIHLPESVTLVSLSATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLFQHVLAGRRMYD
LFEEGEGHKKAVNPDLTRMARMEASRPSYQDRRRGRAMREADRERERRQRSRVWTPSRPE
VIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEAREQVRALVEERTASIPPE
DLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPAR
SVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDIEGHAVVLWQRGMNPEALAGLAGT
RTYPLRSSFKPSYNMAVNLVEQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLA
GYKESMTCHLGDFEEYARLRRELKDRETELARQGAVQRRAEAAVALEKLRPGDVIHVPSG
KYAGLALVLDPGLPAGRSNGHRGFEHHDGPRPLVLTAERQVKRLASIDFPVPVEALERMR
IPKSFNARSPQSRRDLASALRSKAGHIPPERQRKRRSQAADDREIARLRAALRAHPCHGC
NDREDHARWAERYHRLMRDTSQLERRIEGRTNTIARTFDRIVALLTELDYLRGDEVTEHG
KRLARLYGELDLLASECLREGVWEGLSPAELAACVSALVFEARVSDDAMAPKLPSGQAKA
ALGEMVRIWGRLDALEEEFRITQTEGVGQREPDLGFAWAAYMWASGKGLDEVLREAEMPA
GDFVRWCKQVIDVLGQISAAAPEGSTVVKSSRKAVEGLLRGVVAYSSVG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgttgtcagtgcggcccggtacgctcgaaagcacgatgactgaggacctc
tccccggccgagcggtacgcggcggcgcggcggcgcgccgccgagcaggccaccgcgctc
gcgtccttccgcgagatgtacgacttcggcctcgaccccttccagatcgaggcctgccag
gcgctcgaagcgggcaagggggtgctggtcgccgcgcccaccggttccggcaagacgatc
gtgggcgagttcgcggttcacctcgccctgcaacagggccggaagtgcttctacacgaca
cccatcaaggcgctgtcgaaccagaagtacaacgacctctgccggcgctacggcagtggg
aaggtcggcctgctcaccggcgacaacagcgtcaattccgacgccccggtggtcgtgatg
accaccgaggtgctgcggaacatgctctacgcgggctcacagaccctcctcggcctcggc
tacgtggtcatggacgaggtgcactacctctccgaccgcttccgcggcgccgtgtgggag
gaagtgatcatccacctgcccgagtcggtgaccctcgtgtcactgtccgcgaccgtgtcc
aacgccgaggagttcggcgactggctcgacaccgtccggggcgacaccgaggtgatcgtc
tccgagcaccggccggtgccgctgttccagcacgtgctcgccgggcgccggatgtacgac
ctgttcgaggagggcgagggccacaagaaggccgtgaaccccgacctcacgcgcatggcc
cgcatggaggccagccggccgtcgtaccaggaccgcagacggggccgcgccatgcgcgag
gccgaccgggagcgggagcggcggcagcggtcgcgggtgtggacgccgagccggccggag
gtcatagaacggctggacgcggaaggtctgctgcccgcgatcacgttcatcttcagccgg
gccgcctgcgaggccgccgtccagcagtgcctgtacgccggactgcggctgaacgacgag
gaggcgcgggagcaggtccgggcgctggtggaggagcgcacggcctcgattccgcccgag
gacctgcacgtgctcgggtactacgagtggctggagggcctggagcgcggcatcgccgcc
caccacgcgggcatgctgccgaccttcaaggaggtcgtcgaggagctgttcgtccgcggg
ctggtgaaggccgtcttcgccaccgagacgctggccctgggcatcaacatgcccgcgcgg
tcggtggtgctggagaagctcgtcaagtggaacggcgagcagcacgccgacatcaccccg
ggcgagtacacccagttgacggggcgtgcgggacggcgcggcatcgacatcgaggggcac
gccgtggtgctgtggcagcgcggcatgaacccggaggccctggcgggactggcggggacg
cggacgtatccgctgcggtccagcttcaagccgtcgtacaacatggcggtcaatctggtc
gagcagttcgggcggcaccggtcgcgggagctgctggagacctcgttcgcgcagttccag
gccgacaagtcggtcgtcgggatctcccggcaggtgcagcgcaacgaggaagggctcgcc
ggctacaaggagtcgatgacctgccacctcggggacttcgaggagtacgcgcggctgcgg
cgcgaactgaaggaccgcgagaccgagctggcgcggcagggcgccgtgcagcgacgggcg
gaggcggccgtcgcgctggagaagctgcggcccggtgacgtcatccacgtgccgagcggg
aagtacgccgggctggcgctggtgctcgatccggggctgccggccggacggtccaacggg
caccggggcttcgaacaccacgacggaccgcggccgttggtgctgaccgcggagcggcag
gtcaagcggctggcgtcgatcgacttcccggtgccggtggaggcgctggagcggatgcgc
atcccgaagtccttcaatgcccgctcaccgcagtcccggcgggacctggcgtcggcgttg
cgcagcaaggccgggcacatcccgccggagcggcagcgcaagcggcggtcgcaggccgcg
gacgaccgggagatcgcgcggctgcgggccgcgctccgggcgcacccgtgtcacgggtgc
aacgaccgggaggaccacgcccgttgggccgagcgctaccaccggctgatgcgggacacc
tcgcagctggagcggcggatcgaagggcgtacgaacacgatcgcccggacgttcgaccgg
atcgtcgcgctgctgaccgagctggactatctgcgcggtgacgaggtcaccgagcacggc
aagcgcctggcccggctgtacggcgaactggacctgctcgccagcgagtgtctgcgcgag
ggcgtctgggaggggctgtctccggcggaactcgccgcgtgcgtttcggcgttggtgttc
gaggcgcgggtctccgacgacgcgatggcgccgaagctgccctccggccaggccaaggcc
gcgctcggtgagatggtgcgcatctgggggcggctggacgcgctggaggaggagttccgg
atcacccagaccgagggtgtggggcagcgggagcccgacctcgggttcgcctgggccgcg
tacatgtgggcctccggcaaggggctcgacgaggtgctgcgagaggcggagatgccggcg
ggggacttcgtgcggtggtgcaagcaggtcatcgacgtgctggggcagatctcggcggcc
gcgcccgaggggtcgacggtcgtgaagagttcgcgcaaggccgtcgaggggctgctgcgg
ggggtcgtcgcctactcgtcggtggggtga
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