Streptomyces chromofuscus: IPT68_09650
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Entry
IPT68_09650 CDS
T07378
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
schf
Streptomyces chromofuscus
Pathway
schf03030
DNA replication
schf03430
Mismatch repair
schf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IPT68_09650 (dnaE)
03430 Mismatch repair
IPT68_09650 (dnaE)
03440 Homologous recombination
IPT68_09650 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schf03032
]
IPT68_09650 (dnaE)
03400 DNA repair and recombination proteins [BR:
schf03400
]
IPT68_09650 (dnaE)
Enzymes [BR:
schf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IPT68_09650 (dnaE)
DNA replication proteins [BR:
schf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IPT68_09650 (dnaE)
DNA repair and recombination proteins [BR:
schf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IPT68_09650 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QOV46142
UniProt:
A0A7M2TC98
LinkDB
All DBs
Position
complement(2143746..2147285)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKVLWGQPHQKRDDVSGSGGYTHKTMWAVNSTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIARWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAAEYQD
IFGKDKYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEAGAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLIAEMVDTTGMFEKRD
LMPKFDIPEGYTEVSWFREETMRGMQRRFPDGIPDDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYALGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRAEVIRYVTEKYGADKVAQIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
PDVLGKGIPLSGITDPQHPRYSEAGEIRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITDHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGLDIDLLSLPLDDPTTFDLLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELEKNFVIFQAGARNNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIRVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGTNVVESIIKCRKSKGKYSSFPDYLDKVDAVVCNKRTT
ESLIKAGAFDTMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEETSSEPGFGL
DVEFSTEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVVLTIPAVKVTPPMISRLGEILTHHKGDSEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcctgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactccgcgaagaaggcc
ggggtcaccccgatcatcggcatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaaggtcctgtggggccagccgcaccagaagcgggacgacgtctccggttccggtggt
tacacccacaagacgatgtgggcggtgaacagcaccggcctgcacaacctcttccggctc
tcctccgacgcctacgcggagggctggctgcagaagtggccccggatggacaaggagacc
atcgcccgctggtccgagggcatcgtcgcgtccaccggctgcccctccggcgaggtgcag
acccggctgcgcctcggtcacttcgacgaggccctgaaggccgccgccgagtaccaggac
atcttcggcaaggacaagtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggactgctggagatcggccggaagctcggcatccccccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgggcgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacaccctgctgatcgccgagatggtcgacaccacgggcatgttcgagaagcgcgac
ctgatgcccaagttcgacatcccggaggggtacaccgaggtcagctggttccgcgaggag
accatgcgcggcatgcagcgccgcttcccggacggcatcccggacgaccgcatgaagcag
gtcgagtacgagatggacacgatcatctcgatgggcttccccggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaagcagggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccctcggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgccgaggtgatcaggtacgtgaccgagaagtacggcgcc
gacaaggtcgcccagatcggcacctacggcaccatcaaggccaagaacgccatcaaggac
tccgcgcgcgtcctgggctacccgtacgcgatgggcgaccgcctcaccaaggccatgccg
ccggacgtcctcggcaagggcatcccgctctccggcatcaccgacccgcagcacccccgc
tactcggaggcgggcgagatccgggcgatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgcgaagggcgtcgagggcctggtgcggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagaccatcacggaccacgtccccgtctgggtcaggcacaccgac
ggcgtgaccatcacgcagtgggactacccgagctgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgcggtcaagatggtgaaggcc
aacaagggcctcgacatcgacctgctgtccctgccgctggacgaccccacgaccttcgac
ctgctccagcgcggcgacaccctgggcgtcttccagttcgacggcggccccatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtgtcggccctctac
cggccgggcccgatgggcatgaactcccacaccaactacgccctgcgcaagaacgggcag
caggagatcacgccgatccaccccgagctggaggagccgctcaaggaggtcctggacgtc
acctacggcctgatcgtctatcaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgaggag
ctggagaagaacttcgtcatcttccaggccggcgcccgcaacaacggctacagcgacgaa
gccatccaggccctgtgggacgtgctggtgccgttcgccggctacgcgttcaacaaggcg
cactcggcggcgtacggactggtctcgtactggaccgcgtacctgaaggcgaaccacccc
gccgagtacatggccgcgctgctcacctcggtcaaggacgacaaggacaagtcggcggtc
tacctcaacgagtgccgccgcatgggcatccgggtgctcccgccgaacgtcaacgagtcc
gagtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgccgtgcgc
aacgtcggcacgaacgtcgtcgagtcgatcatcaagtgccgcaagtcgaaggggaagtac
tcctccttccccgactacctcgacaaggttgacgcggtcgtctgcaacaagcgcaccacg
gagtcgctgatcaaggcgggcgcgttcgacaccatgggccacacccgcaagggcctgacg
gcgcagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggcggagggg
cagttcgacctcttcggcggcatgggcgaggagacgagcagcgaaccgggcttcggtctg
gacgtggagttctccacggaggagtgggacaagacctacctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctgttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatcgcccagctcaccggcggggacttcggggacggcgcggtcgtc
accatcggcggcatcatctcgggtctgcagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccacggtggaggacctcgccggttccatcgagtgcatgttcttcccggcgacg
taccagctggtgtcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgcctg
gacaagcgggaggacgtaccgcggctggtcgcgatggagctgatggtccccgacctgtcc
aacgcgggcaccaacgcgcccgtggtgctcaccatcccggcggtgaaggtcactccgccc
atgatcagcaggctcggtgagatcctcacccaccacaagggcgacagtgaggtgcggatc
aagctccaggggccgacgaagacgaccgtcctgcggctggaccggcaccgggtgaagccc
gacccggcgctgttcggcgacctgaaggtgctgctgggaccgtcctgcctggcgggctga
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