Streptomyces chromofuscus: IPT68_14835
Help
Entry
IPT68_14835 CDS
T07378
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
schf
Streptomyces chromofuscus
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schf03021
]
IPT68_14835
Transcription machinery [BR:
schf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IPT68_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
HTH_24
HTH_3
Sigma70_ECF
MarR
DUF7343
KORA
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QOV47036
UniProt:
A0A7M2TE72
LinkDB
All DBs
Position
3317608..3318558
Genome browser
AA seq
316 aa
AA seq
DB search
MEDIMSPRLDASHTRTATSTPSSEHLDPIAQDSETYAVHEDAPGVQDDVLAGLPEIPPYD
EVGPVDARALSKTLFERLETLEEGTLEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDI
IQVGTIGLIKAIDRFELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLA
KAGDELAQQLDRAPTVAELAERLGLSHDEVVEGMAASNAYTASSLDAQPEEDDSEGALAD
RIGYEDHGIEGIEYVESLKPLIAELPHRDRKILSLRFVANMTQSEIGEELGISQMHVSRL
LSRTLGRLRKGLTAED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcatgtcaccccggctcgacgcatcgcatacccggacggcgacgtcgaca
ccctcttcggaacatctggatcccatcgcgcaggacagcgagacgtacgcggtccacgag
gacgcccccggcgtccaggacgacgtactggccggacttccggagatccccccgtacgac
gaggtcggtcccgtcgatgcgcgggccctgtccaagaccctcttcgagcggctggaaacg
ctcgaggaaggcacgctcgagtactcctacgtgcgcaacacgctcgtcgaactcaatctg
gccctggtcaagttcgccgcctcccgcttccgctcccgcagtgagccgatggaggacatc
atccaggtcggcaccatcggcctcatcaaggcgatcgaccgcttcgaactcagccgtggc
gtcgagttccccaccttcgccatgccaaccatcatcggcgagatcaagcgcttcttccgt
gacacctcctggtccgtgcgcgtcccgcgccgcctgcaggagctccggctcgacctggcc
aaggccggcgacgagctggcccagcagctcgaccgcgcgcccacggtggcggagctcgcg
gagcggctggggctgtcccacgacgaggtcgtcgagggcatggccgcctccaacgcctac
accgcctcctcgctggacgcgcagcccgaggaggacgacagcgagggcgcgctcgcggac
cggatcggctacgaggaccacgggatcgagggcatcgagtacgtggagtcgctcaagccc
ctgatcgccgaactcccgcaccgggaccggaagatcctctccctgcgtttcgtcgccaac
atgacccagtcggagatcggcgaggagttgggcatctcgcagatgcacgtgtcgcggctg
ctgtcgcggaccctggggcggctgcgcaagggactgacggccgaggactga
DBGET
integrated database retrieval system
