Streptomyces chromofuscus: IPT68_16430
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Entry
IPT68_16430 CDS
T07378
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
schf
Streptomyces chromofuscus
Pathway
schf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IPT68_16430
09124 Replication and repair
03420 Nucleotide excision repair
IPT68_16430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schf03021
]
IPT68_16430
03400 DNA repair and recombination proteins [BR:
schf03400
]
IPT68_16430
Enzymes [BR:
schf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPT68_16430
Transcription machinery [BR:
schf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
IPT68_16430
DNA repair and recombination proteins [BR:
schf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
IPT68_16430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
AAA_22
YflT
IMD
Motif
Other DBs
NCBI-ProteinID:
QOV47317
UniProt:
A0A7M2TF14
LinkDB
All DBs
Position
3674274..3675917
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHERADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIADTMDRYGRLTLSKHPAHGLVLTTTDRPVLEEVLR
SKRIAPLVGARIDPDTVAVHPSERGQIKQVLLKLGWPAEDLAGYVDGEAHPIELDEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEPEEKYRFCSTTETKRKVTEAIVRRFAGQQILVIGQYIDQ
LDELGEHLGAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAVQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTLDQDFAAHRQRFLAEQGYAYRIMDA
DELLAGS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtccactcatcgtccagtccgacaaaacgctgctcctggaagtcgaccacgag
cgtgccgacgactgccgccgggcgatcgcgccgttcgcggaactggagcgggcgcccgag
cacatccacacctaccgcgtgacgccgctcgggctgtggaacgcgcgcgccgccgggcac
gacgcggagcaggtggtggacgcgctcgtgcagtacagccgctacccggtgccgcacgcg
ctgctcgtggacatcgccgacacgatggaccggtacgggcggctgacgctcagcaagcac
ccggcgcacgggctggtgctcaccaccaccgaccggccggtgctggaggaggtgctgcgc
tccaagcgaatcgctccgctggtcggcgcccgcatcgacccggacaccgtggccgtgcac
ccctccgagcgcgggcagatcaagcaggtgctgctgaagctgggctggccggccgaggac
ctcgccgggtacgtcgacggcgaggcgcacccgatcgagctggacgaggacgggtgggcg
ctgaggccctaccagaagcaggccgtggagaacttctggcacggcggctccggcgtcgtc
gtcctgccctgcggggccggcaagacgctggtcggcgccgggtccatggcccaggcgaag
tccacgacgctgatcctggtgaccaacacggtctcggcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcggcacgcgcaaggag
atccggccggtcaccatcgcgacgtaccaggtgctgacgacgaagcggaagggtgtctat
ccgcatctggagctgttcgactcccgtgactgggggctcatcgtctacgacgaggtgcat
ctgctgcccgcgccggtcttcaagttcacggccgacctccaggcccggcgacggctgggg
ctgaccgcgacgctggtccgcgaggacggccgggagtcggacgtgttctcgctgatcgga
ccgaagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtggaggtccgggtcaatctcacggactccgagcggctggcgtacgcgacggcg
gagcccgaggagaagtaccgcttctgctcgaccaccgagaccaagcgcaaggtgacggag
gccatcgtgcgccggttcgccgggcagcagatcctcgtcatcgggcagtacatcgaccag
ctggacgagctgggcgagcacctcggggcgccggtgatcaagggcgagacgtccaacgcc
cagcgcgagaagctgttcgacgccttccgcgagggcgagatcagcgtcctggtcgtctcc
aaggtcgccaacttctccatcgacctgccggaggcgacggtcgccgtccaggtgtccggg
acgttcgggtcgcggcaggaggaggcccagcggctcggacgtgtgctgcggccgaaggcc
gacggccaccaggcccacttctactcggtggtcgcccgcgacacactcgaccaggacttc
gcggcccaccgccagcggttcctggcggagcaggggtacgcgtaccggatcatggacgcg
gacgagctgctcgcggggagctga
DBGET
integrated database retrieval system
