Streptomyces chromofuscus: IPT68_17675
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Entry
IPT68_17675 CDS
T07378
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
schf
Streptomyces chromofuscus
Pathway
schf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IPT68_17675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schf03400
]
IPT68_17675
Enzymes [BR:
schf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IPT68_17675
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IPT68_17675
DNA repair and recombination proteins [BR:
schf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IPT68_17675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
SH3_16
Zn_ribbon_TFIIB
DUF7351
Zn_ribbon_6
Zn_ribbon_8
DZR
DNA_ligase_ZBD
Zn_ribbon_NUD
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QOV41752
UniProt:
A0A7M2SZL3
LinkDB
All DBs
Position
complement(3925266..3926111)
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AA seq
281 aa
AA seq
DB search
MPELPDVEGFRRVFESCAMSRVVRRVDVRDAGVLHGVSARRLREALEGRRFTVLDRHGKW
LLARTGGGHTLMLHFGMTGRLVCEHPDVAVAPHDRVLFTVGRDRQLRFRDQRKLQGLWLA
DDAQVARLLDRQGPDAMAVRREEFEAALAARRGALKTALTDQSVLAGLGNLLADEILWRA
GLRPTGRAADLTEADRRRLYTEMRGTLRSAITAGCVPPRDSWLTGHRDAPDPHCPRCGAP
LRRSRLAGRTTVWCPRCQPGAPEEEPGSRPGTVWDGGAGAR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccggacgtcgagggcttccgaagggtgttcgagtcctgcgcgatgagc
agggtcgtccggcgcgtcgacgtgcgggacgcgggcgtgctgcacggggtcagcgcgcgg
cggctgcgcgaggcgctggaaggccgccggttcaccgtgctcgaccgccacggcaagtgg
ctcctcgcccgcaccggcggcggccacaccctgatgctgcacttcggcatgaccggccgg
ttggtctgcgagcatcccgacgtcgccgtcgcaccccacgaccgcgtcctgttcaccgtg
ggccgcgaccgtcagctccgcttccgcgaccagcgcaagctgcagggcctgtggctggcc
gacgacgcccaggtcgcgcggctgctggaccgccagggtcctgacgcgatggcggtgcgc
cgcgaggagttcgaggccgcgctcgccgcccgccggggcgccctgaagaccgcgctcacc
gaccagtccgtgctggccgggctcggcaatctgctcgccgacgagatcctgtggcgcgcg
ggcctccgccccaccggccgggcggccgacctcaccgaggcggaccgccggcgcctgtac
accgagatgcgcggcaccctgcgctccgcgatcaccgcgggctgcgtcccaccgcgcgac
tcctggctcaccggccaccgcgacgcccccgacccgcactgcccccgctgcggcgcgccc
ctgcgccggtcccggctggcgggccgcacgacggtgtggtgcccgcggtgccagccgggg
gctcctgaggaggagccgggatcgcggccagggacggtctgggacggtggcgcaggggcc
cggtaa
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