Streptomyces chromofuscus: IPT68_21070
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Entry
IPT68_21070 CDS
T07378
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
schf
Streptomyces chromofuscus
Pathway
schf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPT68_21070 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schf03019
]
IPT68_21070 (recQ)
03400 DNA repair and recombination proteins [BR:
schf03400
]
IPT68_21070 (recQ)
Enzymes [BR:
schf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPT68_21070 (recQ)
Messenger RNA biogenesis [BR:
schf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IPT68_21070 (recQ)
DNA repair and recombination proteins [BR:
schf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IPT68_21070 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QOV42330
UniProt:
A0A7M2T0Z8
LinkDB
All DBs
Position
4668312..4670351
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AA seq
679 aa
AA seq
DB search
MGGTGGVGGMAAVADSEALAALHKVFGYDAFRGEQEAVIEHVVAGGDAVVLMPTGGGKSL
CYQIPALVRPGTGIVVSPLIALMQDQVDALRALGVRAGFVNSTQDFDERRVVEAEFLAGE
LDLLYLAPERLRLDATLDLLSRGKISVFAIDEAHCVSQWGHDFRPDYLTLSLLGERWPDV
PRIALTATATRATHQELTQRLNMPTARHFVASFDRPNIQYRIVPKADPKKQLLSFLREEH
AGDAGIVYCLSRKSVESTAEFLTRNGIEAVPYHAGLDAGTRAAHQSRFLREDGLVVVATI
AFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVVQQRKLIQS
GEGDEAFRRRAAAHLDAMLALCETARCRRGQLLAYFGQDPDPAGCGNCDTCLTPPETWDG
TIAAQKVLSTVVRLQRERGQKFGAVQIVDILLGKRTGKVIQFDHDQLSVFGIGQELTEGE
WRGVVRQLLAQGLLAVEGEYGTLVLTEASGAVLRREREVPLRKEPKKPVSAGAGSSSSGR
GERKAKAAATELPEELLPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATVWPTTVAQ
LGGIGGVGEKKLATYGEGVLAVLASVGGAPGTAAAADAAPAAADATPAAAADATDADPEA
HDDWPETDAEPEPDDWMQQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggacaggcggggtaggcggcatggcggcagtggctgacagcgaggcgttggct
gcactccacaaggtgttcgggtacgacgccttccgtggagagcaggaagcggtcatcgag
catgtggtggccggtggcgacgccgtcgtcctcatgccgaccggcggcggcaagtccctc
tgctaccagatcccggccctcgtcagaccgggcacgggcatcgtcgtctcgccgctcatc
gccctgatgcaggaccaggtggacgcgctgcgagcgctcggtgtgcgcgccgggttcgtc
aactccacgcaggacttcgacgagcggcgcgtggtggaggccgagttcctcgccggcgaa
ctggacctgctgtacctggcgccggagcggctgcgactcgacgccacgctggacctgctg
tcgcgcgggaagatctccgtcttcgcgatcgacgaggcgcactgcgtgtcccagtggggg
cacgacttccggcccgactacctgacgctgtcgctgctcggcgagcgctggcccgacgtg
ccgcggatcgcgctcacggcgaccgccacgcgggccacgcaccaggagctcacccagcgg
ctgaacatgccgacggcccggcacttcgtggcgagcttcgaccggcccaacatccagtac
cggatcgtgcccaaggcggaccccaagaagcagctgctgagcttcctgcgcgaggagcac
gcgggcgacgcggggatcgtctactgcctgtcgcgcaagtcggtggagtcgacggccgag
ttcctgaccaggaacgggatcgaggcggtgccgtaccacgcggggctggacgcgggtacg
cgcgcggcacaccagtcccgcttcctgcgcgaggacgggctggtcgtcgtggcgacgatc
gccttcgggatgggcatcgacaagccggacgtgcggttcgtggcccacctggacctgccg
aagtcggtggagggctactaccaggagacgggccgtgccgggcgggacgggctgccgtcc
acggcctggatggcgtacggcctcaacgacgtcgtacagcagcgcaagctgatccagtca
ggcgagggcgacgaggcgttccggcgccgggcggcggcgcatctggacgcgatgctcgca
ctgtgcgagaccgcccggtgccgccggggccagctgctcgcctacttcgggcaggacccg
gacccggccggctgcggcaactgcgacacctgtctcacgccgcccgagacctgggacggc
accatcgcggcgcagaaggtgctgtcgacggtggtgcggctgcagcgggagcggggtcag
aagttcggcgcggtgcagatcgtcgacatcctgctgggcaagcgcaccggcaaggtgatc
cagttcgaccacgaccagctctccgtgttcggcatcggccaggagctcaccgagggcgaa
tggcggggtgtcgtccggcagctgctggcgcagggtctgctcgcggtcgagggggagtac
gggacgctggtgctgaccgaggccagcggtgcggtgctgcggcgggagcgggaggtgccg
ctgcgcaaggagccgaagaagccggtgagcgcgggggccgggtcctcgtcgtccgggcgg
ggcgagcgcaaggccaaggccgccgcgaccgagctgcccgaggaactgctgcccgcattc
gaggcgctgcgcgcctggcgcgccgaacaggcccgcgaacagggcgtcccggcctacgtc
atcttccacgacgccacgctgcgggagatcgccacggtgtggcccaccacggtggctcag
ctcggcggcatcggcggagtcggcgagaagaaactggcgacgtacggggagggcgtgctg
gcggtgctggcctccgtgggcggtgcgcccggcacggctgcggcggccgacgcggcaccg
gcagcggcggacgcgaccccggccgccgcggccgacgcgaccgacgcggacccggaggcg
cacgacgactggcccgagacggacgcggagccggagcctgacgactggatgcagcagtag
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integrated database retrieval system
