Streptomyces chromofuscus: IPT68_21405
Help
Entry
IPT68_21405 CDS
T07378
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
schf
Streptomyces chromofuscus
Pathway
schf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IPT68_21405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schf03021
]
IPT68_21405
03400 DNA repair and recombination proteins [BR:
schf03400
]
IPT68_21405
Enzymes [BR:
schf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IPT68_21405
Transcription machinery [BR:
schf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IPT68_21405
DNA repair and recombination proteins [BR:
schf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IPT68_21405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
QOV42388
UniProt:
A0A7M2T3X8
LinkDB
All DBs
Position
4732072..4735971
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIEQRRDADLEARAKKLEAD
LAELEAEGAKSDVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLYFLTTDDEGRDIKGA
GRPFSSVAEAIMAFDAGELSLQARVDIRFPVGTIPPRGWVPPVREEGEPEWQQGDSFTLR
TTLGRALFNELLPEDYPFVDYEVGKKQLSQIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVSISDVVVPEAKKEIVAKWEAADEKVQKQYERGLITKDERTQELIGIWTNATNEV
AEAMTGNFPKTNPIFMMVSSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLRLSIAERG
ADGSLIKAEDVETSVYARCLAEDIVVDGKVLAPAGTDLGDVLIDELIRHGVSEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIVVTPDDGSDEMAYPISKRARL
MVSEGEHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSRFEHENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgccccc
gtcacgcacatctggtacttcaagggcgttccgtcgcggctgggctacctgctcgacctc
gcccccaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtacgtggac
gaggagcgccgtacgcgcgacctgccctcgctggaggcgcacgtctccgtcgagcgccag
cagatcgagcagcgccgggacgccgacctggaggcccgcgccaagaagctcgaggccgac
ctggccgagctggaggccgagggcgccaagtccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgtgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgggaccgcttcggcacgtacttcgacggttcgatgggcgccgcggcg
ctgcagaagcgcctggagtccttcgaccttgacgaggaggccgaacgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgcgccctgaagcgtctgaaggtcgtctcc
gcgttcctgcagacgtccaacagccccaagggcatggtcctcgactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccggaacaaccgactgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtccggtcaccggtcccggcaaccgcccgctgaag
tccctcagcgacatgctgaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtgctgggcctgtacttcctcaccacggacgacgagggccgcgacatcaagggcgcc
ggccgtccgttctcctcggtcgccgaggcgatcatggcgttcgacgccggcgagctgtcg
ctgcaggcgcgggtcgacatccgcttcccggtgggcaccatcccgccgcgtggctgggtg
ccgccggtccgcgaggagggcgagccggagtggcagcagggtgacagcttcacgctgagg
accacgctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctcccagatcgtcaacgacctggccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttctactgggccacc
cgttccggtgtcaccgtgtccatctccgacgtcgtcgtccccgaggcgaagaaggagatc
gtcgccaagtgggaggcggcggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacccaggagctcatcggcatctggaccaacgcgaccaacgaggtc
gccgaggccatgacgggcaacttcccgaagaccaacccgatcttcatgatggtttcctcg
ggcgcccgaggaaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcg
aacgccaagaacgagaccatcccgcggcccatcaaggcgtcgttccgtgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctcacccgtcgtctggtcgacgtctcccaggacgtgatc
atccgcgaggaggactgcggcaccgaccgtggtctgcggctgtcgatcgccgagcgcggc
gccgacggttcgctgatcaaggcggaggacgtcgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtcgtggacggcaaggtgctggccccggccggtaccgacctgggcgac
gtgctcatcgacgagctgatccggcacggggtctccgaggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggcacctgcgccatgtgctacggccgctcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcgtgcggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagatggcctaccccatctcgaagcgtgcccgtctg
atggtcagcgagggcgagcacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggccagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtgtacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgatgccgagctgctgccc
ggtgagctggtcgagcgttcgcgcttcgagcacgagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcagctcatgggtatcaccaaggcctcgctggcgacc
gagtcgtggctgtcggcggcgtccttccaggagacgaccagggtcctcacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtgggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
DBGET
integrated database retrieval system