Streptomyces chromofuscus: IPT68_23870
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Entry
IPT68_23870 CDS
T07378
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
schf
Streptomyces chromofuscus
Pathway
schf03420
Nucleotide excision repair
schf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IPT68_23870
03430 Mismatch repair
IPT68_23870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schf03400
]
IPT68_23870
Enzymes [BR:
schf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPT68_23870
DNA repair and recombination proteins [BR:
schf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IPT68_23870
MMR (mismatch excision repair)
Other MMR factors
IPT68_23870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOV42817
UniProt:
A0A7M2T289
LinkDB
All DBs
Position
5267465..5270986
Genome browser
AA seq
1173 aa
AA seq
DB search
MSARITDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVKAGVTDPDVIDPDHPPGEPVISTYHAFAGRLL
TDHGLRIGLEPASRLLADATRYQLAARVLREAPGPYPALTRSFPDLVSDLLALDSELAEH
LVRPESLRAWDAGLLRTLEGAKLTNADLRKVPDTAAARRELAELVLRYRAAKRERDLLDF
GDQIALAARLAQLPDVGRILRDEFRVVLLDEYQDTSVAQRVLLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHPDGSTAERQALSQNRRSGGRLLDLANGLAEPLRAM
HAGVEALRPAPGAERDGMVRCALLRTHAEEIDWIADSIAHLVRTGKGPGEIAVLCRTATD
FAQIQGALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVSHARVDADDDPDRRLADAVEGVDPAEVISLADALDTFLETPLEGG
GDDDGLPFSPDARVRFARLATELRELRRSLSDPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDVAASFAANESEASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVTGTFPSSQGREKWTSQARVLPHELRGDADTLPDIRTWDARGMKAF
HEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPTQKKPRGPSDFLLALYEHCAAGHG
EIEAWADEPAEDEENPALHRTAADQLWPLPLDEDALARRRAAAETVLTHLDTLATAHPGA
VHDPGTYDDPDWPAPPDDEIPGDGDAYEDDPYGEGDPADWDSWDTHRPTDTDSRGAADAR
RPTVPHQATPPDVDATPGARPHPPQSGPHPLTPEEARTIASWDRDLDALTGELLRARESV
TEVALPASLTASQLLRLAADPDGFAQELARPMPRPPQPAARRGTRFHAWVEARFEELTLP
MLEPEELPGSEAEIADERDLEALKEAFERTEYAHRTPYRVEAPFQLALAGRVVRGRIDAV
YRYGDGEGTTYEIVDWKTGRGRTADPLQLALYRLAWAEQKGVPLESVTAAFVYVRTGEVV
RPDDLPDRAALERLLLGEPYGDEPHEQGVGAGR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcacgtatcaccgatcccgagcagctcaaggagctcctcgggattccgttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtccggcaagacgacggtgatggcggcacgcgtggtgtggctggtcggtaccggccag
gtcgcgcccgaacaggtgctgggcctcaccttcaccaacaaggccgccggtgaactcgcc
gagcgggtccgcaaggcgctcgtcaaggccggcgtcaccgatccggacgtcatcgacccg
gaccatccgcccggtgagccggtgatctccacctaccacgccttcgcgggccgcctgctg
accgaccacggcctgcgcatcggcctcgaaccggcctcccgcctgctcgccgacgccacc
cgttaccagctcgccgcacgcgtgctgcgcgaggccccgggtccctacccggcgctcacc
cgctccttcccggacctggtcagcgacctgctggccctcgactccgagctggccgaacac
ctcgtgaggccggaaagcctgcgcgcgtgggacgccgggctgctgcgcacgctggagggc
gccaagctcaccaacgccgacctgcgcaaggtccccgacaccgccgccgcccgccgcgag
ctggccgagctcgtcctgcgctaccgggccgccaagcgggaacgggacctgctcgacttc
ggcgaccagatcgccctcgccgcacggctcgcccagctccccgacgtcggccgcatcctg
cgcgacgaattccgcgtggtcctcctcgacgagtaccaggacacgtccgtcgcccagcgc
gtcctcctggcaggcctgttcggcggcggcaccggccacccggtgaccgccgtcggtgac
ccctgccaagccatctacggctggcgcggcgcctccgtcgccaacctcgacgacttcccc
gagcacttcgcccaccccgacggcagcacggcggagcgccaggcgctgagccagaaccgc
cgcagcggcggccgcctcctcgacctcgccaacggtctcgccgagccgctgcgcgccatg
cacgcgggcgtggaggccctccgccccgcccccggcgccgaacgcgacggcatggtccgc
tgcgccctgctgcgcacccacgccgaggagatcgactggatcgccgactcgatcgcacat
ctggtccgcaccggcaaggggcccggcgagatcgccgtcctgtgccgcacggcgaccgac
ttcgcccagatccagggcgcgctcgtcgcccgggacattcccgtcgaggtcgtcggcctc
tcggggctgctgcacctgccggaggtggccgacctggtcgccgtctgcgaggtgctccag
gacccgggcgccaacgcctccctggtccgcctgctcaccggcccccgctggcgcatcggt
ccgcgcgacctcgctctcctggggcgacgcgcccggcttctggtgtcccacgcgcgggtg
gacgccgacgacgaccccgaccgcaggctcgccgacgcggtcgagggcgtcgacccggcc
gaggtgatctccctcgccgacgccctggacacgttcctggagaccccgctggagggcggc
ggggacgacgacgggctgccgttctcgccggacgcgcgtgtgcggttcgcccgcctcgcc
accgagctgcgtgaactgcgccgctccctgtccgacccgctcatggacgtcctgcaccgc
gtcctcgccgtcaccggactggaagtcgagctgtcggcgtccccgcacgctctggccgcc
cgtcgccgggagaccctgtccaacttcctggacgtcgccgcctccttcgccgccaacgag
agcgaggccagtctgctcgccttcctgggcttcctgcgcaccgccgcccagtacgagaag
ggcctcgacaacgcgctgccgggcggtgagaacaccgtcaaggtgctcaccgcccacaag
tccaagggcctggagtgggacgtcgtcgccgtccccgggctcgtcaccgggacgttcccc
agcagtcagggtcgtgagaagtggacctcccaggccagggtgctcccgcacgaactgcgc
ggcgacgccgacacgctgcccgacatccgcacgtgggacgcgcgcggcatgaaggccttc
cacgaggccatgaaggaccaccagcacaccgaggagctccgcctcggctacgtcaccttc
acccgccctcgctccctcctcctcggctccggccactggtggggccccacccagaagaag
ccccgcggcccctccgacttcctcctcgccctctacgagcactgcgccgccggtcacggc
gagatcgaggcgtgggcggacgaaccagccgaggacgaggagaacccggccctccaccgg
acggccgccgaccagctgtggccgctgcccctggacgaggacgccctggcgcgccgccgc
gcggcggccgagacggtcctgacccacctcgacaccctcgccaccgcccaccccggcgcc
gtacacgaccccggcacgtacgacgacccggactggcccgcaccgccggacgacgagatt
ccgggcgacggggacgcgtacgaggacgacccgtacggggaaggggacccggccgactgg
gactcgtgggacacgcaccggccgaccgacacggactcccgtggggccgcggacgcgcgc
cgcccgaccgtcccgcaccaggcgacgcccccggacgtcgacgcgacaccgggcgcccgc
ccgcaccccccgcagtccgggccgcaccccctcacccccgaggaggcccgcacgatcgcc
tcctgggaccgtgacctcgacgccctcaccggcgagctgctccgcgcgcgggagtccgtc
acggaagtcgcgctgcccgcctcgctgaccgcctcccagttgctgcgcctggccgccgac
ccggacggcttcgcacaggaactggcccgccccatgccgcggccgccgcagcccgcggcc
cgccggggaacgcgcttccacgcctgggtggaggcccgtttcgaggagctgacgctgccc
atgctggagccggaggagctgccgggcagtgaggcggagatcgccgacgagcgtgacctg
gaggctctgaaggaggcgttcgagcgcaccgagtacgcccaccgcacgccctaccgggtg
gaggcgcccttccagctggccctcgccggccgcgtcgtccggggccgtattgacgccgtc
taccggtacggggacggcgaggggacgacgtacgagatcgtcgactggaagaccggccgc
ggccggaccgcggaccccctccagctcgccctgtaccggctcgcctgggccgagcagaag
ggcgtgcccctggagtcggtcacggccgcgttcgtctacgtgcgcacgggcgaggtcgta
cggccggacgaccttccggaccgggccgcgctggaacggctgctgctgggcgagccgtac
ggtgacgaaccgcacgaacagggtgtcggcgcgggccgatag
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