Streptomyces chromofuscus: IPT68_27275
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Entry
IPT68_27275 CDS
T07378
Name
(GenBank) HAMP domain-containing protein
Organism
schf
Streptomyces chromofuscus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
T4SS
DUF4795
HAUS-augmin3
Med21
RNase_Y_N
OmpH
ATG14
Motif
Other DBs
NCBI-ProteinID:
QOV43404
UniProt:
A0A7M2T584
LinkDB
All DBs
Position
6031855..6037299
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AA seq
1814 aa
AA seq
DB search
MESGAATRGTKPRAKGGQSPRSRNGTTEVDTAALNRLLAALVSMRDGNFRKRLTVSGDGV
MAEIAAVFNEVADRNLHLTGELSRVRRVVGREGKLTERLETGACEGSWAAAIDASNALVD
DLVWPVSEVSRVLFAVAEGDLSPRMELRTNAPDGSGHPLRGEFLKVGRTVNNLVDQLSTF
TDEVTRVASEVGTEGKLGGQAQVRGMSGSWKDLTESVNTMAYRLTAQVRDIALVTTAVAK
GDLSRKVTVHVAGEMLELKETVNTMVDQLSAFSSEVTRVAREVGTEGELGGQAQVPGVAG
VWKELTDSVNTMAGNLTAQVRGIAEVTTAVANGDLSRKVTVQARGEVAQLAETINQMTET
LRIFADEVTRVANEVGAEGRLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDIAAVTT
AVANGDLSQKVTVDVAGEMLELKNTVNGMVDQLSAFGSEVTRVAREIGDEGELGGQAQVP
GAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKNTVNT
MVDQLSSFADQVTTMAREVGTEGRLGGQARVEGVSGTWKELTDAVNSITGNLTAQVRQIA
QVTTAVARGDLSQKITMDVRGEILELKNTVNTMVDQLSAFADQVTRVAREVGTEGRLGGQ
AQVPGVAGVWRDLTDSVNGMAGNLTAQMRQIAQVATAVARGDLSQKITVDARGEILELKN
TLNTMVDQLSSFAEEVTRVAREVGTEGKLGGQAEVQGVSGTWKDLTQSVNFMANNLTVQV
RSIAHVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFADQVTRVAREVGTEGI
LGGQAHVPGVTGIWKDLSDNVNLMAKNLTVQVRNISQVAMAVANGDLTRTVTIEARGEVA
QLADTFNTMVKTLSSFAEQVTKVAREVGTDGILGGQAHVPGVAGTWKDLTESVNQMASNL
TGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVTRVAREVG
TEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNLKIDVDAS
GEIQELQDYINKMIANLRDTTIANKEQDWLKGNLARISALMQGRRDLEDVASLIMSELTP
VVSAHHGAFFLAMQPADSAGNDDPYELRMLGSYGYSMGSMPTSFRPGEALVGTAAQEKRT
ILVENAPSGYLKISSGLGEAPPAQVIVLPVLFEGKVLGVIELASFTPFTQIQKDFLNQIA
EMIATSVNTISVNTKTEVLLKQSQELTEQLRERSAELENRQKALQASNAELEEKAELLAQ
QNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAKLLAD
NADGNLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVDYVEA
TFRPLTAEKGLDLSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGSVELVIRPAR
DDVPQAIREQLLEAGSLTDADADLIAFSVTDTGIGIAAGKMRVIFEAFKQADGTTSRKYG
GTGLGLSISREIAQLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPHGYQQPAPSAPAAER
AEWPELAEATVETPAEVRSYHETQNGAAALFRRRRRHTRVAEQRALPQEPWQAGEAGAEA
EAHPRAGVRFGGEKVLIVDDDIRNVFALTSVLEQHGLSVLYAENGREGIEVLEQHDNVAV
VLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIESGASDYVTKPVDP
DHLLAVMEQWMQGE
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcacgaagccgcgcgcgaagggcggacagtccccg
cgcagccggaatgggaccaccgaggtggacacggccgccctgaaccggctgctggcggcc
ctggtctcgatgcgcgacggcaatttccgcaagcggctgacggtgtccggggacggcgtg
atggcggagatcgccgccgtcttcaacgaggtcgccgaccggaacctgcacctgacgggc
gagctgtcgcgggtacggcgcgtcgtgggacgcgagggaaagctcaccgagcggctggag
acgggggcctgtgagggctcctgggcggccgcgatcgacgcctcgaacgcgctggtcgac
gacctcgtgtggccggtttccgaggtcagccgggtgctgttcgcggtggccgagggtgat
ctgtcgccgcggatggagctgaggacgaacgcgccggacgggtccgggcatccccttcgc
ggggagttcctgaaggtcgggcggaccgtcaacaacctggtcgaccagctgtcgacgttc
accgacgaggtcacgcgcgtggccagtgaggtgggcaccgagggcaagctcggcgggcag
gcccaggtgcgcggtatgtccggttcgtggaaggacctgacggagtccgtcaacacgatg
gcgtaccggctgaccgcccaggtgcgggacatcgcgctagtgacgacggcggtcgccaag
ggtgatctgtcccggaaggtcacggttcacgtggccggcgagatgctggagctgaaggaa
accgtcaacacgatggtggaccagctctccgcgttctcctccgaggtgacccgggtcgcg
cgcgaggtgggtaccgagggcgagctgggcggccaggcgcaggtgcccggggtggccggt
gtgtggaaggagctcacggactccgtcaacaccatggccggcaacctcaccgcccaggtg
cgcggcatcgccgaggtgaccacggcggtcgccaacggtgatctgtcgcgcaaggtgacc
gtgcaggcgcggggcgaggtcgcgcagctcgccgagacgatcaaccagatgacggagacg
ctgcggatcttcgcggacgaggtcacgcgtgtggccaacgaggtcggcgcggaggggcgg
ctcggcggacaggcgaacgtgccgggcgccgcggggacctggaaggacctgacggactcc
gtcaacaccgtgttccgcaatctcaccactcaggtgcgggacatcgcggccgtgacgacg
gccgtcgccaatggtgatctgtcgcagaaggtcaccgtggacgtggccggcgagatgctg
gagctgaagaacaccgtcaacgggatggtggaccagctgtccgccttcggttccgaggtc
acgcgggtggcgcgggagatcggcgacgagggcgagctgggcggccaggcgcaggtgccg
ggcgccgcggggacgtggaaggacctgacggactccgtcaacacggcgttccgcaacctc
accggacaggtgcgcaacatcgcccaggtgacgacggcggtcgccaatggtgatctgtcg
cagaaggtcaccgtggacgtctccggcgagatgctgcaactgaagaacaccgtgaacacg
atggtggaccagctgtcgtcgttcgccgaccaggtgacgaccatggcccgggaggtcggt
accgaggggcggctcggtgggcaggcgcgcgtggagggcgtctccgggacgtggaaggag
ctcaccgacgccgtcaactccatcacgggcaacctgaccgcccaggtgcggcagatcgcc
caggtgaccacggcggtggcgcggggcgacctgtcgcagaagatcaccatggacgtgcgc
ggggagatcctggagctgaagaacaccgtcaacacgatggtggaccagctctcggccttc
gccgaccaggtgacgcgggtggcccgcgaagtgggtacggagggccggctcggcggtcag
gcgcaggtgcccggcgtggccggtgtgtggcgggacctgacggactccgtgaacggcatg
gccggcaacctgacggctcagatgcggcagatcgcccaggtggccacggcggtggcgcgg
ggtgacctgtcgcagaagatcacggtggacgcgcgcggcgagatcctggagctgaagaac
acgctcaacacgatggtggaccagctgtcctcgttcgccgaggaggtcacgcgcgtggcc
cgtgaggtgggcaccgagggcaagctgggcggccaggccgaggtgcagggcgtctccggc
acctggaaggacctcacccagtccgtcaacttcatggcgaacaacctcaccgtgcaggtg
cgcagcatcgcccacgtcaccaccgccgtcgccaagggcgacctgtcgaagaagatcacc
gtcgacgccaagggcgagatcctggagctcgtcaccaccgtcaacacgatggtggaccag
ctgtcgtccttcgccgaccaggtgacccgggtggcccgcgaggtgggtaccgagggcatc
ctgggcggccaggcgcacgtgccgggcgtcacgggcatctggaaggacctcagcgacaac
gtcaacctgatggcgaagaacctcaccgttcaggtgaggaacatctcccaggtcgcgatg
gccgtcgccaacggcgacctgacgcgcacggtgacgatcgaggcgcgcggtgaggtggcg
cagctcgccgacaccttcaacacgatggtcaagacgctgagttcgttcgccgagcaggtc
accaaggtggcccgtgaggtgggcacggacggcatcctcggcggtcaggcgcacgtgccg
ggtgtggccggtacgtggaaggacctcaccgagtcggtgaaccagatggcgtccaacctg
accggccaggtgcggaacatcgccatggtgacgacggccatcgccaagggtgacctgacg
aagaagatcgacatcgacgcgcgcggggagatcctcgaactcaagacgaccatcaacacg
atggtcgaccagctgtcctcgttcgctgaggaggtcacgcgcgtggcccgtgaggtgggt
acggagggccagctgggcggccaggcgcgcgtgcgggacgtcgacggcacctggcgggac
ctgacggagtccgtgaacgagatggccgggaacctcacccggcaggtgcgtgccatcgcg
cgcgtggcgaccgcggtgacccgcggcgacctgaacctgaagatcgacgtggacgcctcc
ggcgagatccaggagcttcaggactacatcaacaagatgatcgccaacctgcgcgacacc
acgatcgccaacaaggagcaggactggctcaagggcaacctcgcccggatctccgcgctg
atgcaggggcgccgggacctggaggacgtggcctcgctgatcatgagcgagctgacgccg
gtggtctccgcgcaccacggggcgttcttcctggcgatgcagccggccgacagcgcgggc
aacgacgacccgtacgagctgcggatgctgggctcgtacggctattcgatgggctccatg
ccgacctcgttccgccccggtgaggcgctggtcggcacggccgcccaggagaagcgcacg
atcctggtggagaacgcgcccagcggctatctgaagatctcctccgggctcggcgaggcg
ccgcccgcgcaggtgatcgtgctgccggtgctgttcgagggcaaggtgctcggcgtgatc
gaactggcctcgttcactccgttcacgcagatccagaaggacttcctcaaccagatcgcc
gagatgatcgcgaccagcgtcaacaccatctccgtcaacaccaagacggaggtgctgctg
aagcagtcgcaggagctgaccgagcaactgcgggagcgctccgccgagttggagaaccgg
cagaaggccctgcaggcgtccaacgccgaactggaggagaaggccgagctgctggcccag
cagaaccgcgacatcgaggtgaagaacaccgagatcgaggaggcgcggcaggtcctggag
gagcgcgccgagcagctcgcggtctcgatgcgctacaagagcgagttcctggccaacatg
tcgcacgagctgcgtacgccgctgaactcgctgctcatcctggccaagctgctcgccgac
aacgcggacggcaacctgacgcccaagcaggtcgagttcgccgagacgatccacggggcc
ggctccgacctgctccagctgatcaacgacatcctggacctgtcgaaggtcgaggcgggc
aagatggacgtctcgccgacgcgcatcgcgctcgtccagctcgtggactacgtggaggcc
acgttccggccgctgaccgcggagaagggcctcgacctgtcggtacgggtctctccggag
ctgcccgccacgctgcacaccgacgagcagcggctgctgcaggtgctgcgcaacctgctg
tcgaacgcggtgaagttcaccgactcgggctcggtggagctggtcatccgtcccgcgcgc
gacgacgtgccgcaggccatccgggagcagctgctggaggccgggtcgctgaccgacgcg
gacgccgacctgatcgcgttctcggtgaccgacaccggcatcgggatcgcggccggcaag
atgcgggtgatcttcgaggcgttcaagcaggcggacggcacgaccagtcgcaagtacggt
ggcacgggcctcggcctgtccatctcgcgggagatcgcccagctgctcggcggggagatc
cacgcgcagagcgaaccgggccgcggctccacgttcacgctctacctgccgctgcacccc
agcgagctgcctccgcacggctaccagcagcccgcgccctcggccccggccgcggagcgc
gccgagtggcccgagctggccgaggcgacggtcgagacgccggccgaggtgaggtcgtac
cacgagacccagaacggggccgccgcgctgttccggcgccgccgccggcacacgcgcgtg
gccgagcagcgggccctgccgcaggagccgtggcaggccggtgaggccggcgcggaggcg
gaggcccacccgcgcgcgggtgtccggttcgggggtgagaaggtactgatcgtcgacgac
gacatccgcaacgtcttcgcgctcaccagcgtcctggagcagcacgggctgtcggtgctg
tacgccgagaacggccgtgagggcattgaggtgctggagcagcacgacaacgtggcggtc
gtcctgatggacatcatgatgcccgagatggacggctatgcgacgaccacggcgattcgc
cggatgccgcagttcgccggactgccgatcattgcgctgacggccaaggcgatgaagggc
gaccgggagaaggcgatcgagtcgggcgcgtccgactatgtgacgaaaccggtcgatccc
gaccacctgctggcggtgatggagcagtggatgcagggcgaatga
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