Streptomyces chromofuscus: IPT68_30570
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Entry
IPT68_30570 CDS
T07378
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
schf
Streptomyces chromofuscus
Brite
KEGG Orthology (KO) [BR:
schf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schf03021
]
IPT68_30570
Transcription machinery [BR:
schf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IPT68_30570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
DUF7343
HTH_Crp_2
HTH_24
HTH_28
HTH_3
MarR
HTH_10
GerE
DUF134
KORA
YdaS_toxin
Glyco_hydro_67N
Motif
Other DBs
NCBI-ProteinID:
QOV43966
UniProt:
A0A7M2T5M6
LinkDB
All DBs
Position
6801058..6801864
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AA seq
268 aa
AA seq
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MRTAPASAKHHRHDDAPDTADAFRRLAALPDGPERDALRDEIVEAWLPMADRLAGRFRSR
GESHEDLRQVAALGLVKAVDRYDPARGHAFESYAVPTVTGEIKRHFRDHMWTLHVPRRVQ
ELRNRVRIAVQELSSGLQGPSGRQPSVAEIAEHADMSEADVRAGMEALESFSALSLDAEL
PGGEDGYSLGDALGAADPALETVVDREAVKPRLAALPERERAILYMRFFRDMTQSRIAEQ
LGISQMHVSRLISRSCDRVREEVMRGAA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgccccagcgagcgcgaagcaccaccgccacgacgacgcccccgacaccgcc
gacgccttccgccggctcgccgcactgcccgacgggcccgagcgcgacgcgctgcgcgac
gagatcgtcgaggcctggctgcccatggcggaccggctggccggacggttccgcagccgc
ggcgagagccatgaggacctgcgccaggtcgccgccctcgggctggtgaaggccgtcgac
cggtacgaccccgcgcgtggacacgcgttcgagagctatgccgtgcccacggtcaccggt
gagatcaagcggcacttccgtgaccacatgtggaccctgcacgtgccccggcgggtgcag
gagctgcgcaaccgggtgcggatcgccgtgcaggagctgtcgtcgggcctccagggcccc
tccgggcggcagccgagtgtggccgagatcgccgagcacgccgacatgagcgaggcggac
gttcgcgccgggatggaggcgctggagagtttcagcgcgttgtcgctggacgccgagctg
ccgggcggcgaggacggctactcgctcggcgacgcgctcggggccgccgatcccgcgctg
gagacggtggtggaccgggaggccgtcaagccccggctggccgcgttgcccgagcgggag
cgggcgatcctgtacatgcgattcttccgcgacatgacgcagagtcggatcgccgagcag
ctggggatctcccagatgcacgtgtcccggctgatcagccggtcgtgcgaccgggtgcgc
gaggaggtcatgcgcggcgccgcctag
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