Streptomyces changanensis: NRO40_05950
Help
Entry
NRO40_05950 CDS
T09753
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
schg
Streptomyces changanensis
Pathway
schg03030
DNA replication
schg03430
Mismatch repair
schg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NRO40_05950
03430 Mismatch repair
NRO40_05950
03440 Homologous recombination
NRO40_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schg03032
]
NRO40_05950
03400 DNA repair and recombination proteins [BR:
schg03400
]
NRO40_05950
Enzymes [BR:
schg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NRO40_05950
DNA replication proteins [BR:
schg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NRO40_05950
DNA repair and recombination proteins [BR:
schg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NRO40_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
RNase_H_2
AP_endonuc_2
PTCB-BRCT
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
UUS30415
UniProt:
A0ABY5N5M3
LinkDB
All DBs
Position
1346155..1347135
Genome browser
AA seq
326 aa
AA seq
DB search
MTMLDDRMTAAAWPAAYPQGYAVVDVETTGLSAHDRIVSAAVYRLDARGRVEDHWYTLVN
PERDPGPVWIHGLTSDVLEGAPLFADVAAEFSERLDGRVLVAHNAYFDWTMIAREYARAE
RTAPVRQRLCTMALAKELALPLPNMKLESLAAHFGVEQRQAHHALDDARVLAEAFRPSLR
AAAERGVRLPLLECLPLVEWSAAPAAATPRIGRQATYGSGGWRPSRKRPACPYPNPGRYT
SNKPLKQGMRVAFSGDTSVERELLEDRAVEAGLHIATSVSRLTSLLVTNDPGAGTSKLVK
AKAFGTPIVDEAAFTHLLRDVAPADE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctcgacgaccgtatgacagcagcagcctggccggccgcctacccgcagggg
tacgcggtcgtcgacgtggagaccaccggcctctccgcccacgaccggatagtgtcggct
gccgtctaccggctcgacgcgcgcggccgggtggaggaccactggtacacgttggtcaac
ccggagcgtgacccgggacccgtgtggatccacggcctgacgagcgacgtgctggagggc
gcgcccctcttcgccgacgtggccgcggagttctccgagcggctcgacggccgcgtcctc
gtcgcgcacaacgcctacttcgactggacgatgatcgcccgggagtacgcccgggcggag
cgcaccgccccggtgcggcagcggctgtgcaccatggcgctggccaaggaactggcgctg
ccgctgcccaacatgaagctggagtcgctggccgcccacttcggcgtggagcagcgccag
gcgcaccacgccctcgacgacgcgcgggtgctggcggaggccttccggccgagtctgcgc
gcggcggccgagcgcggggtgcggctgccgctgctggagtgcctccccctcgtggagtgg
tcggcggcgcccgccgcggccacgccccgcatcggccgtcaggccacgtacgggtcgggc
ggctggcggccgtcacggaagcgaccggcgtgcccgtacccgaaccccgggcggtacacg
tcgaacaagccactcaagcagggcatgcgggtcgcgttctcgggtgacacctcggtcgag
cgcgagctgctggaggaccgggccgtcgaggccgggctgcacatcgcgacgagtgtctcc
cggctgaccagcctgctcgtcaccaacgacccgggagccggcacctccaagctcgtgaag
gccaaggcgttcgggacgccgatcgtcgacgaggccgccttcacccacctactgcgggat
gtggccccggccgacgagtga
DBGET
integrated database retrieval system
