Streptomyces changanensis: NRO40_06190
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Entry
NRO40_06190 CDS
T09753
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
schg
Streptomyces changanensis
Pathway
schg00040
Pentose and glucuronate interconversions
schg01100
Metabolic pathways
schg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
schg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NRO40_06190
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NRO40_06190
Enzymes [BR:
schg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NRO40_06190
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UUS30457
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All DBs
Position
complement(1400121..1401440)
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AA seq
439 aa
AA seq
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MRIPARRVRALGRAAALAGCTTLALALTAPTPATALGTGGGHDPARRTLPAGDGWASADG
GTTGGAAADAAHVYTVTTWEEFRAALAADGDAPRIVRVVGTLDATASGCGAFEAPGYDFD
RYLADYDPAVWGRDKEVSGPQEELRAASAKNQDRAIKAFVPSRTTIIGVGRNAGIVGGSL
QIKDADDVIVRNLTLESPLDCFPQWDPTDGATGAWNSEYDAMVVYGSTHVWIDHNTFTDG
RHPDSSLARHYGELYQRHDGLLDIVRGADLVTASWNVFADHDKTLMIGNSDGAGATDRGR
LRVTLHHNLFDEVVERAPRVRFGKVDAYNNHHVVPERGYGYSWGVGAESQLVAEWNSVRL
PRGVRAGTVLKKWKEAPVTVAGNVVNGRPVDLLAVHNAQFPDEALASGAGWTPTLRTRVD
DPRVLPWLLTHRAGAGRAR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccccgcacgccgcgtccgggccctcggcagggccgcggcgctggccggctgc
accacgctggcactcgccctcaccgcccccaccccggcgaccgccctcggtacgggcggc
ggccacgaccccgcccgccgcaccctgcccgccggtgacggctgggcctccgccgacggc
ggcaccaccggcggcgccgccgccgacgccgcacacgtgtacaccgtcaccacctgggag
gagttccgggccgcgctcgccgccgatggcgacgccccgaggatcgtccgggtcgtcggc
acgctcgacgccacggcaagcggctgcggggccttcgaggcgcccggctacgacttcgac
cggtacctcgccgactacgaccccgccgtctggggccgtgacaaggaggtcagcggcccc
caggaggagctgcgcgcggcctccgccaagaaccaggaccgggcgatcaaggcgttcgtc
ccctcccgcaccaccatcatcggcgtcggccggaacgccgggatcgtcggcggcagcctg
cagatcaaggacgccgacgacgtcatcgtccgcaacctcaccctggagagccccctcgac
tgcttcccccagtgggacccgaccgacggggcgacgggcgcctggaactccgagtacgac
gcgatggtcgtgtacggctccacgcacgtgtggatcgaccacaacacgttcaccgacggc
cgccacccggacagctcgctggcccgccactacggcgagctctaccagcgccacgacggg
ctgctcgacatcgtccgcggcgccgacctggtcacggcgtcctggaacgtcttcgccgac
cacgacaagacgttgatgatcggcaacagcgacggcgcgggcgccaccgaccgcggccga
ctgcgggtcaccctccaccacaacctcttcgacgaggtcgtcgaacgcgccccgcgggtg
cggttcggcaaggtcgacgcgtacaacaaccaccacgtggtgccggagcggggctacggc
tacagctggggtgtcggcgccgagtcgcagctggtcgccgagtggaactcggtccgcctg
ccgcggggcgtgcgggccgggaccgtcctcaagaagtggaaggaggcaccggtcacggtc
gcgggcaacgtcgtcaacggccgtcccgtggacctgctcgcggtccacaacgcgcagttc
cccgacgaggcgctggcgtccggcgccggctggacgccgaccctgcgcacccgcgtcgac
gacccccgcgtcctgccgtggctgctcacccaccgcgccggcgcgggccgcgcgcgctga
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