Streptomyces changanensis: NRO40_13400
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Entry
NRO40_13400 CDS
T09753
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
schg
Streptomyces changanensis
Pathway
schg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRO40_13400 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schg03019
]
NRO40_13400 (groL)
03110 Chaperones and folding catalysts [BR:
schg03110
]
NRO40_13400 (groL)
03029 Mitochondrial biogenesis [BR:
schg03029
]
NRO40_13400 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schg04147
]
NRO40_13400 (groL)
Enzymes [BR:
schg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NRO40_13400 (groL)
Messenger RNA biogenesis [BR:
schg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NRO40_13400 (groL)
Chaperones and folding catalysts [BR:
schg03110
]
Heat shock proteins
HSP60 / Chaperonin
NRO40_13400 (groL)
Mitochondrial biogenesis [BR:
schg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NRO40_13400 (groL)
Exosome [BR:
schg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NRO40_13400 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NRO40_13400 (groL)
Exosomal proteins of breast cancer cells
NRO40_13400 (groL)
Exosomal proteins of colorectal cancer cells
NRO40_13400 (groL)
Exosomal proteins of bladder cancer cells
NRO40_13400 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
DUF4844
Motif
Other DBs
NCBI-ProteinID:
UUS31731
LinkDB
All DBs
Position
complement(3044614..3046236)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
KAVEAVSGALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFATDMERMEAVLEDPYILIVNSKVSAVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGQVIS
EEVGLKLDNAGLDLLGRARKVVITKDETTIVDGAGDSEQVAGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SSVFDKLELEGDEATGAAAVKAALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLVAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKNAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcacggcgcggtctcgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcacccttggtcccaagggtcgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgtcctcgcccaggcgctcgtccgc
gagggtctgcgcaacgtcgccgccggcgccaacccgatggccctgaagcgcggcatcgag
aaggccgtcgaggccgtctccggtgcgctgctggagcaggcgaaggacgtggagacgaag
gagcagatcgcctccaccgcgtccatctccgccgccgacacccagatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtccaacacc
ttcgggctcgagctcgagctcaccgagggtatgcgcttcgacaagggctacatctcggcg
tacttcgcgaccgacatggagcgcatggaggccgtcctcgaggacccctacatcctcatc
gtcaactccaaggtctccgcggtgaaggacctcctcccgctgctggagaaggtcatgcag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtccacgctg
gtcgtcaacaagatccgcggcacgttcaagtccgtcgcggtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctcaccggtggccaggtcatctcc
gaggaggtcggcctcaagctggacaacgccggtctcgacctcctgggccgcgcccgcaag
gtcgtcatcaccaaggacgagacgaccatcgtcgacggtgccggtgacagcgagcaggtc
gcgggccgcgtgaaccagatccgcgccgagatcgagaactccgactcggactacgaccgc
gagaagctccaggagcgcctcgcgaagctggccggcggcgtggccgtcatcaaggccggc
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcg
tccagcgtcttcgacaagctggagctggagggcgacgaggccaccggtgccgccgccgtg
aaggccgccctggaggccccgctcaagcagatcgccgtcaacgccggcctcgagggcggt
gtcgtggtggagaaggtgcgcaacctgaccccgggtcacggcctgaacgccgcgaccggc
gagtacgtcgacctggtcgccgagggcatcatcgacccggccaaggtgacgcgctccgcg
ctgcagaatgccgcgtcgatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaagaacgccgcgccggccggcggcggcatgccgggcggtgacatggacttc
tga
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