Streptomyces changanensis: NRO40_18045
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Entry
NRO40_18045 CDS
T09753
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
schg
Streptomyces changanensis
Pathway
schg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
schg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NRO40_18045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schg03021
]
NRO40_18045
03400 DNA repair and recombination proteins [BR:
schg03400
]
NRO40_18045
Enzymes [BR:
schg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NRO40_18045
Transcription machinery [BR:
schg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NRO40_18045
DNA repair and recombination proteins [BR:
schg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NRO40_18045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UUS32524
LinkDB
All DBs
Position
4034055..4035077
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgctgaccgaagaggtcgtcgacgagtaccgctcgcgg
ttcgtcatcgagccgctggagccgggcttcggctacacgctcggcaacagcctccgccgt
acgctcctctcctcgatcccgggtgcggcggtcacgtccatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcaccgccgcggacatcgccccgccggccggtgtcgaggtgcacaac
cccgacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgcggtgcagaacaagcaggtgggtcaggagatcggc
cgcatcccggtcgactcgatctactcgccggtcctcaaggtcacctacaaggtcgaggcc
acccgagtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggt
ctcgcccgtgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctcgccgccgacctcgcgctgccgatcgaggagctcgagctcaccgtccgttcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcgttccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
tga
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