Streptomyces changanensis: NRO40_22170
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Entry
NRO40_22170 CDS
T09753
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
schg
Streptomyces changanensis
Pathway
schg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRO40_22170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schg03019
]
NRO40_22170
03016 Transfer RNA biogenesis [BR:
schg03016
]
NRO40_22170
Enzymes [BR:
schg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NRO40_22170
Messenger RNA biogenesis [BR:
schg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NRO40_22170
Transfer RNA biogenesis [BR:
schg03016
]
Prokaryotic type
tRNA degradation factors
NRO40_22170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UUS33252
LinkDB
All DBs
Position
4990544..4992763
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AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALINGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTVELVKGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPVGEFPVFLDYQDDVLEALTAAVKSELSQALTIAGKQEREAELDRIKE
IAAEKLLPQFEGREKEISGAYRALTKKLVRERVIKDKVRIDGRGLTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQMLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISEEIEGKTHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAQVGSQAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLAVGSKVQVEIAEIDQRGKLSL
IPVMADEDGAEGDKDDTDQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagccgtgatcgacaacggttccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccacgaccgcgtcgaagaagcccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggtctgcccttctccggcccgatcggcggcacccgc
gtcgccctgatcaacggccagtgggtcgcgttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagacggtcgagctcgtcaagggcggcgccgaggcgccg
accgaggaggtcgtcgccgccggtctcgaggccgcgaagcccttcatcaaggtcctgtgc
aaggcccagtcggacctcgccgccaaggccgccaagccggtcggcgagttcccggtcttc
ctcgactaccaggacgacgtcctggaggcgctgaccgccgcggtgaagagcgagctgtcg
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagctcgaccgcatcaaggag
atcgccgccgagaagctgctcccgcagttcgagggtcgcgagaaggagatctccggcgcg
taccgcgcgctgaccaagaagctggttcgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgtggcctgacggacatccgcacgctggccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagatgctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtcggttcgccg
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgcgatcgtgccggtcctcccg
acgcgcgaggagttcccgtacgcgatccgccaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggttcggtctgcgcctccaccatgtccctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggcatcgccatgggcctcatctccgaggagatcgagggcaag
acgcactacgtcgcgctcaccgacatcctcggtgccgaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtcaccgccctccagctcgacaccaagctggac
ggcatcccggcgtccgtcctggccgcggccctcaagcaggcccgcgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtcccccaacgccccg
cggatcatcaccgtgaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgctgagatcacgatcgaggacgacggc
acgatctacatcggtgcccaggtcggctcgcaggccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
accaccaccttcggtgcgttcgtctccctgatgcccggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcgcg
gtcggctccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctc
atccccgtgatggcggacgaggacggcgccgagggcgacaaggacgacaccgaccagtga
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