Streptomyces changanensis: NRO40_24215
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Entry
NRO40_24215 CDS
T09753
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
schg
Streptomyces changanensis
Brite
KEGG Orthology (KO) [BR:
schg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schg03021
]
NRO40_24215
Transcription machinery [BR:
schg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NRO40_24215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
KORA
GerE
HTH_Crp_2
Sigma70_ECF
MarR
HTH_37
Topo-V_HhH_2_2nd
DUF1492
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UUS33623
LinkDB
All DBs
Position
5547214..5548062
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AA seq
282 aa
AA seq
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MTAVLAGTKTEHIAELRKPADPKSVAPKDARAMTRLFLDRLASLEEGTHEYQDVRNTLIE
MNMSLVRYAAGRFRSRGADEMEDIVQVGMIGLIKAIDRFEISREVEFTTFAVPYIMGEIK
RFFRDTSWAVHVPRRLQEARVELARATEELRSRLGRTPTVKELAELMSLTEDEVIEARLA
SNAYNSSSLDAAVTGDGEDGEAALADFIGVEDHAMELVEDFHSLAPLVADLDERERRILH
LRFVEELTQSQIGEQLGCSQMHVSRLLSRTLAKLRKGMLATN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggttctggccggtacgaagacggagcacattgccgagctgcggaagccggct
gaccccaagagcgtcgccccgaaggacgcccgggcgatgacccggctcttcctggaccgc
ctggcctccctggaggagggcacccacgagtaccaggacgtccgcaacaccctgatcgag
atgaacatgtcgctcgtccggtacgcggccggccgcttccgcagccggggcgcggacgag
atggaggacatcgtccaggtcggcatgatcggcctgatcaaggccatcgaccggttcgag
atctcccgtgaggtggagttcaccaccttcgccgtcccctacatcatgggcgagatcaag
cggttcttccgcgacacgtcgtgggccgtccacgtgccgcgccgcctccaggaggcgcgc
gtcgagctggcccgcgccaccgaggagctgcgcagccggctcggccgcaccccgacggtc
aaggagctcgcggagctgatgagcctcacggaggacgaggtcatcgaggcgcggctcgcc
tccaacgcctacaactccagctccctggacgcggccgtcaccggcgacggcgaggacggc
gaggcggctctcgccgacttcatcggcgtcgaggaccacgccatggagctggtcgaggac
ttccacagcctcgcccccctggtcgccgacctcgacgagcgcgagcggcgcatcctgcac
ctgcgcttcgtcgaggagctcacccagtcgcagatcggcgagcagctcggctgctcccag
atgcacgtctcgcgcctgctgtcgcggaccctggcgaagctgcgcaagggcatgctggcg
acgaactga
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