Streptomyces changanensis: NRO40_24680
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Entry
NRO40_24680 CDS
T09753
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
schg
Streptomyces changanensis
Pathway
schg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NRO40_24680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schg03000
]
NRO40_24680
03400 DNA repair and recombination proteins [BR:
schg03400
]
NRO40_24680
Enzymes [BR:
schg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NRO40_24680
Transcription factors [BR:
schg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NRO40_24680
DNA repair and recombination proteins [BR:
schg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NRO40_24680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
UUS33704
LinkDB
All DBs
Position
5659986..5661461
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AA seq
491 aa
AA seq
DB search
MHTDTERCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPRNMVFYPSAAACQQA
GFRACKRCRPDTSPGSPEWDVRADAVARAMRLIRDGVVDREGVPGLAARLGYSTRQIERQ
LRAELGAGPLALARAQRAQTARVLIETTAMPMADIAFAAGFSSVRTFNETVREVFALAPG
ELRARATGPRAAPSPTPGVIALRLPYRTPLDPSNLFGHLAATAVPGVEEWRDGAYRRTLA
LPNGPGIVSLAPAAGHIACRLLLTDPRDLSHAISRCRWLLDLDADPVAVDEQLRADPLLA
PLVDAAPGRRVPRTVDAAEFAVRAVLGQQVSTAAARTHAGRLVTAHGTPVEDPEGGLTHL
FPAPGALAALDPEALALPRTRRTTLTTLVGALADGTLRLGLDTDWEEARTRLLALPGLGP
WTVEAIAMRALGDPDAFLPTDLGVRRAAAGLGLPSTPAALTARAAAWRPWRAYAVQYLWA
TDSHPINHLPS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgcgtacgggcggtccggtcgaaggacgcccgcttcgac
ggctggttcttcaccgccgtcctcaccacccgcatctactgccgccccagctgcccggtg
gtgccccccaagccccggaacatggtgttctacccgagcgccgccgcctgccagcaggcc
gggttccgcgcctgcaagcgctgtcggcccgacaccagccccggctccccggagtgggac
gtacgggccgacgccgtcgcccgcgccatgcgcctcatccgcgacggcgtcgtcgaccgc
gagggcgtccccggtctcgccgcccgcctcgggtactccacccgccagatcgagcggcag
ctccgcgccgaactgggcgccgggccgctcgccctcgcccgcgcccagcgcgcgcagacc
gcccgcgtcctcatcgagaccaccgccatgcccatggcggacatcgccttcgccgccggg
ttctcctccgtgcgcaccttcaacgagacggtccgcgaggtcttcgccctcgcccccggc
gagctgcgcgcccgtgccaccggcccccgcgccgccccctcgcccacccccggcgtcatc
gccctgcggctgccctaccgcacgcccctcgacccgtccaacctcttcgggcacctcgcc
gccaccgccgtccccggcgtcgaggagtggcgcgacggcgcctaccggcgcacgctcgcc
ctcccgaacgggcccggcatcgtctccctcgccccggccgccggccacatcgcctgccgg
ctgctcctcaccgacccgcgcgacctctcccacgccatcagccgctgccgctggctcctc
gacctcgacgccgaccccgtcgccgtcgacgagcagctgcgcgccgacccgctgctcgcg
ccgctcgtcgacgcggcgcccggccgccgcgtcccccgtaccgtcgacgccgccgagttc
gccgtccgcgccgtcctcggccagcaggtctccacggccgcggcccgcacccacgccggg
cgcctggtcaccgcgcacggcacccccgtcgaggaccccgaggggggactcacccatctg
ttccccgcgcccggggcgctcgccgcgctcgaccccgaggccctcgccctgccgcgcacc
cgccgcacgacgctcaccacccttgtcggcgctctcgccgacggcaccctccgactgggc
ctggacaccgactgggaggaggcccgcacccgcctcctcgccctgcccggcctgggcccc
tggaccgtcgaggcgatcgccatgagggccctcggcgaccccgacgccttcctccccacc
gacctcggcgtccgccgggccgccgccgggctcggcctgccgtccactcccgccgcgctc
acggcacgcgccgccgcctggcgcccctggcgcgcctacgccgtccagtacctctgggcg
accgacagccacccgatcaaccacctcccctcctga
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