Spiroplasma chinense: SCHIN_v1c01420
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Entry
SCHIN_v1c01420 CDS
T06905
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
schi
Spiroplasma chinense
Pathway
schi03420
Nucleotide excision repair
schi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCHIN_v1c01420 (pcrA)
03430 Mismatch repair
SCHIN_v1c01420 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schi03400
]
SCHIN_v1c01420 (pcrA)
Enzymes [BR:
schi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCHIN_v1c01420 (pcrA)
DNA repair and recombination proteins [BR:
schi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCHIN_v1c01420 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SCHIN_v1c01420 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
AAA_12
DEAD
CbiA
Bact_hydrolase
WHD_DUF6293
Motif
Other DBs
NCBI-ProteinID:
QEH61340
UniProt:
A0A5B9Y2S4
LinkDB
All DBs
Position
153507..155672
Genome browser
AA seq
721 aa
AA seq
DB search
MSDLLHGLNDRQVDSVITTDVPLRIIAGAGSGKTKVITTKIAYLIEKEGYNPNKVLAVTF
TNKAANEMKDRIQKNSNGAYRTPFIMTFHSFCVRVLREDFAHANLRQDFTIIDTTDQTKI
VRKILKNLNMDDTKNKPEKKIISKISGWKSKFMTWQEAEQESYSPVDKKFAKVYRDYIAY
LEERGFVDFDDLILKVHQLFKNVIEVRNKWISRFDYIMVDEFQDTNDTQFDLIKWLTNNR
GCLTVVGDPDQTIYSWRGAKVNIILNFEKEFKNARTVMLTQNYRSTKPILDLANNFIDNN
KNREKKDIFTEKLEGEKVSLKEANSRNFEAKYVALKIKELVEKQNYNYSDIFVLYRTNAW
SLEFEKEFANSKIPFQMIGGLQFRDRKVIKDVTSLLRAVAIKDDLAFERIFGFIPKVGAV
TEQRLFELAHNMGVNMFDLLVNCENEVMSVSKNLTSLSNALRQANEMFLKNEKLVDICRL
LVNKVGYEDRINIKEKEGIETKQNLQAYYDQMSQYDIAYDQEENDTNRLVKFLQDESLIV
SETNSEVPNKVTLLTIHSAKGLENKVVFVVGLCQDVFPSKMSFMSTDSLEEERRAFYVAV
TRAEEMLFISYVSGEYSFMSNGNLGPSKFISELDPNLYELEKNIFFHSPTEMSSQKYSSG
VMDIKPEKLDSGVLTGDIVEHMMFGEGVVTKILDKYISVAFKNPAFGTKSIPINSGAWKK
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgatttattacatggattaaatgatagacaagttgatagtgtaattacaactgat
gtaccgttaagaattatagctggtgctggtagtggtaaaacaaaagtaattacaactaaa
attgcctatttaattgaaaaagaaggatacaatcctaataaagttttagcagttactttt
acaaataaagctgcaaatgaaatgaaagatagaattcaaaagaattctaatggtgcttat
agaactcctttcattatgacttttcactcattttgtgtaagagtgttaagagaagatttt
gcacacgcaaatctaagacaagattttacaatcattgatacaacagaccaaacaaaaatt
gtaagaaaaattcttaaaaatcttaatatggatgatactaaaaataaaccagagaaaaaa
atcatttcaaaaattagtggttgaaaatcaaaatttatgacttgacaagaagctgaacaa
gaatcttattctccagttgataaaaaatttgcaaaagtttatagagattatattgcatac
cttgaagaaagaggttttgttgactttgatgatttaattttgaaagttcaccaattattt
aaaaatgtaattgaagttagaaataaatgaatttctagattcgattatattatggtagat
gagtttcaagatacaaatgatactcaattcgatttaattaaatgacttacaaataacagg
ggttgtttgacagttgttggagatcctgaccaaactatttattcttggagaggagctaaa
gtaaatattattttaaactttgaaaaagaatttaaaaatgcaagaacggtaatgttaact
caaaactatcgttctacaaaacctattttagatttagcaaataactttattgataataat
aaaaatagagaaaagaaagacatctttactgaaaaacttgaaggtgaaaaagtttctcta
aaagaggcaaactcaagaaattttgaagctaaatatgtagctttaaaaattaaagaatta
gtcgaaaaacaaaattacaactatagtgacatttttgttttgtatagaacaaatgcttgg
tcattagagtttgaaaaagagtttgcaaactctaaaattccttttcaaatgattggagga
ttacaatttagagaccgtaaggttattaaagatgtaacttcgcttttaagagctgttgca
attaaagatgatttagcttttgagagaatttttggtttcattccaaaagttggagctgta
actgaacaaaggttatttgaacttgctcataacatgggtgtaaacatgtttgacttatta
gtaaattgtgaaaatgaagttatgagtgtttctaaaaacttaacttcactttcaaatgct
ttaagacaagcaaatgaaatgtttttaaaaaatgaaaaacttgtagatatttgtagatta
cttgtaaataaagttggttatgaagatagaatcaacattaaagaaaaagaaggtattgaa
acaaaacaaaaccttcaagcgtattacgaccaaatgagtcaatatgatatagcatatgat
caagaagaaaatgatacaaatagacttgtaaaattcctacaagacgaaagtttaattgta
agtgaaacaaatagtgaagtaccaaacaaggttactttattgacaattcactcagcaaaa
ggactggaaaataaagttgtctttgttgttgggttatgtcaagatgtgttcccttcaaaa
atgagctttatgtctacagattctctggaagaagaaagaagagcattttatgtagctgtt
acaagagctgaagagatgttatttataagttatgtatctggggaatattcatttatgtct
aatggtaatttaggaccaagtaaattcatttctgaattagacccaaatctttatgaatta
gaaaaaaacatattctttcactcaccaacagagatgtctagtcaaaaatattcatcagga
gttatggacataaaacctgaaaaactagattcaggtgttttgacaggtgatatagtagaa
catatgatgtttggagaaggtgttgtaactaaaatactggacaaatatatttcagtggca
tttaaaaaccctgcatttggtactaaatccataccaattaactcaggtgcttgaaagaaa
aaatag
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