Spiroplasma chinense: SCHIN_v1c04210
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Entry
SCHIN_v1c04210 CDS
T06905
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
schi
Spiroplasma chinense
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schi03032
]
SCHIN_v1c04210 (hupB)
03036 Chromosome and associated proteins [BR:
schi03036
]
SCHIN_v1c04210 (hupB)
03400 DNA repair and recombination proteins [BR:
schi03400
]
SCHIN_v1c04210 (hupB)
DNA replication proteins [BR:
schi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SCHIN_v1c04210 (hupB)
Chromosome and associated proteins [BR:
schi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SCHIN_v1c04210 (hupB)
DNA repair and recombination proteins [BR:
schi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SCHIN_v1c04210 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-CCDC81_bac_1
FAZ1_C
Motif
Other DBs
NCBI-ProteinID:
QEH61618
UniProt:
A0A5B9Y3B8
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All DBs
Position
478753..479028
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AA seq
91 aa
AA seq
DB search
MTKKELSEKLSAEFETSKVEAEKMVNFIFDTISSTLVSREEVAIAGFGKFVTSERAAREG
VNPSTGAKIQIAATTVAKFKVAKQLKEAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaagaattatctgaaaaattatcagctgaatttgaaacttcaaaagttgaa
gctgaaaaaatggtaaacttcatttttgatacaatttcatcaactttagtaagtagagaa
gaagttgctatcgcaggatttggaaaattcgtgacaagcgaaagagctgcacgtgaaggg
gtaaacccatcaactggagcaaaaatccaaattgctgcaactactgttgcaaaatttaaa
gttgcaaaacaacttaaagaagctgtggctaaataa
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