Spiroplasma chinense: SCHIN_v1c05480
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Entry
SCHIN_v1c05480 CDS
T06905
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
schi
Spiroplasma chinense
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schi03019
]
SCHIN_v1c05480 (cshB)
03009 Ribosome biogenesis [BR:
schi03009
]
SCHIN_v1c05480 (cshB)
Enzymes [BR:
schi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCHIN_v1c05480 (cshB)
Messenger RNA biogenesis [BR:
schi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCHIN_v1c05480 (cshB)
Ribosome biogenesis [BR:
schi03009
]
Prokaryotic type
rRNA helicases
SCHIN_v1c05480 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
PhoH
EssA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QEH61745
UniProt:
A0A5B9Y4L0
LinkDB
All DBs
Position
608778..610139
Genome browser
AA seq
453 aa
AA seq
DB search
MKFSDFGFKKFINDALNDIGFEKPTSIQEKVIPLLKKHRTVIAQSHTGTGKTHAFLLPIL
NNLDYSSNKVQCLIITPTRELARQIFANIKELIKYNEQATCALYVGGDDIEKHQDGLKNK
QPMIVVGTPTRLRGLYEQNYLQLTTANHVVIDECDMIFELGFIDDIDLMLSKMSKTTNIS
LFSATINNGLKPFLTKYLSNSIFIENLDKKPSSKNIEHILVWTKNRENKDILKLIVDSIN
PYVAMIFVNRKNQIKEVIGWLNEFGVRNIGELHGDLDPRQRTNMQKRIQNMEFKWIVASD
VASRGIDIDGVSHVISIDLPQELDYYIHRSGRTGRNQYSGQSYVLFNSNNQHQIDTLKSQ
GVEFSNKKLVGNQLVDVVQKEKIKKVNPNNPAAVEEAKILNRYKKKPIKPGYKKKRKAEI
DKVKKDIRRKHIKESIAKIKKEKYKKRREELFD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagcgactttggatttaaaaaatttataaatgatgcacttaatgatattggt
tttgaaaaaccaacaagtatccaggaaaaggttattcctttattaaaaaaacatagaaca
gtgattgcacaatcacatacaggaactggaaaaactcacgcgtttcttttaccaatactt
aataacttagattattcatctaataaagtgcaatgtttaataattactccaactagagaa
ttagcaagacaaatttttgcaaatattaaagaacttataaaatacaatgagcaagcaact
tgtgcattgtatgtcggtggagatgatattgaaaaacatcaagatggtttaaaaaataaa
caaccaatgatagttgtgggaactccaactagacttagaggtttatatgaacaaaattac
ttgcaattaacaacagcaaatcatgttgttattgatgaatgtgatatgatttttgaacta
ggatttatcgatgatattgatcttatgctttcaaaaatgtctaaaacaaccaacattagt
ttattttcggcaactattaataatggtttaaaaccatttttaactaagtacttatctaac
tctatttttatcgagaatttagacaaaaaaccaagtagtaaaaatattgaacatattctt
gtatgaacaaaaaatagagaaaacaaagatattttaaaattaatagtagattcaattaat
ccttatgttgctatgatttttgttaatagaaaaaatcaaataaaagaagtaattgggtga
ttaaatgaatttggtgttagaaatattggagaactacatggtgatttagacccaagacaa
agaacaaatatgcaaaaaagaattcaaaatatggaattcaaatgaattgttgcatcagat
gttgcttctagagggattgatattgatggagtaagtcatgttatttcaatcgatttacca
caagaattagattactacatccatagaagtggacgtactggtagaaatcaatattctgga
caaagttatgttttatttaattcaaacaatcaacatcaaattgatacattaaaatctcaa
ggtgttgagttttcaaataagaaattggtaggtaaccaattagttgatgttgttcaaaaa
gaaaaaatcaaaaaagttaacccaaataatccggcagccgttgaagaggctaaaatctta
aatagatataagaaaaaaccaattaaaccaggttataaaaagaaaagaaaagctgaaatt
gataaagttaaaaaagatattagaagaaaacatattaaagaatcaattgcaaaaattaaa
aaagaaaaatacaaaaaaagaagagaagaactatttgattag
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