Spiroplasma chinense: SCHIN_v1c06200
Help
Entry
SCHIN_v1c06200 CDS
T06905
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
schi
Spiroplasma chinense
Pathway
schi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCHIN_v1c06200 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schi03400
]
SCHIN_v1c06200 (recD)
Enzymes [BR:
schi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SCHIN_v1c06200 (recD)
DNA repair and recombination proteins [BR:
schi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCHIN_v1c06200 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
SH3_13
UvrD_C_2
AAA_11
HHH_RecD2
OB_YrrC
PIF1
AAA_12
Helicase_RecD
UvrD-helicase
RsgA_GTPase
AAA_22
NTPase_1
NPHP3_N
nSTAND3
AAA
AAA_28
AAA_17
AAA_29
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QEH61817
UniProt:
A0A5B9Y6D1
LinkDB
All DBs
Position
704967..707162
Genome browser
AA seq
731 aa
AA seq
DB search
MKTLKGKIKNFLFNNEDYGVAVFTLLDNEKNSTVITGNIGVMKVGVIYEVEGENVVDRKR
NQTSFVVSSIKQVKEFSKDVYIKYFSSSLFPSIGKKLATNIVEHYKKDIFKKILKNKDEL
KLIEDMTEVKANIVYDVVKEFFSENDILDKFINNNLKQEFYNYLQRNVDDSNEIRSILEN
NFYEFAFVNKLTPFEEVDKVALAFGVEEFSDERISWWANYLGNELLFRTGDTYFDLYQIR
KMLSQKFFGFNENDFDSKLLYAKKNNILYFENKKIYTKESYNDEKFIADKLIAIENESYN
IKDYDFEKYLEQVEKFVGEKLYIDNFKYNEEQVLAIRNFCENNISIVTGGPGTGKTTIIA
GIVKMYELIFSNSNYSIAAPTGRAASRIKESSDFNAQTIHKLLRYIGNDNFEFCLERPLS
KELLIIDECSMIDNHLFASLLRGITDIKKLVLVGDIHQLPSVSYGNLYEDVIESEKFSIT
KLVKNNRQVSKENKNSIIDLSTAIREEKINEFNFEDTNNVEFIFNDDSNELKKEILKIYT
KNKPSNIEDEINDIQIIAPMYKEQLGIHFINSQIQNVFNPSNGKEFKRGEIYFRPNDKVM
YIENDPFLELSNGDVGYIENLVMEKNKLKHAEINFSSRRKEITSSQFSKINLNYACSIHK
TQGSEYKNVILVLDNSNNYSTFFLNKKMIYTAVTRAKNKLFILTSKDLFLKTCGKDMKLR
RTTLKERICSL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttaaaaggaaaaataaaaaactttttatttaacaacgaagattatggagtt
gcagtttttactttacttgataacgaaaaaaactcaaccgttataactggaaacattggt
gttatgaaagttggagttatttatgaagttgaaggagaaaatgtagttgatagaaaaaga
aatcaaacatcttttgtagtttcttcaattaaacaagtaaaagaattttcaaaagatgtt
tatataaaatatttttcttcctctttatttccatcgataggaaaaaaacttgcaacaaat
attgttgaacattataaaaaagatatttttaaaaagattttaaaaaacaaagatgaatta
aaattaattgaagacatgacagaagtaaaagcaaatattgtttatgatgttgttaaagaa
ttttttagtgagaatgatattttagataaatttataaataataatttaaaacaagaattt
tataattacttgcaaagaaatgtagatgactcaaatgagattagatctattttagaaaac
aacttttatgagtttgcttttgtaaataaactaactccatttgaagaagttgataaagtt
gcacttgcatttggtgttgaagaatttagtgatgaaagaatttcttgatgagcaaactat
ctaggaaacgaattacttttcagaactggtgatacatattttgatttgtatcaaataaga
aaaatgttaagtcaaaagtttttcggatttaatgaaaatgattttgatagtaaattatta
tatgcaaagaaaaataatattttatattttgaaaataaaaaaatatatacaaaagaaagt
tataacgatgaaaaatttattgcagataaattaatagcaattgaaaacgaaagttataat
ataaaagattatgactttgaaaaatatttagaacaagttgaaaaatttgttggtgaaaaa
ttatatattgataattttaaatataatgaagaacaagttttagcaataagaaatttttgt
gaaaataatataagtattgtaacaggtggtcctggtactggtaagacaactattattgcg
ggaatcgtaaaaatgtatgaattaatctttagcaattctaattactcaattgcagctcca
acaggtagagctgcaagtagaattaaagagtcatcagattttaatgctcaaacaattcat
aaacttttgagatatattggaaatgataattttgaattttgtttagaaagacctttatca
aaagaattattaattattgatgaatgctctatgatagataatcatttatttgcatctctt
ttaagaggaataactgatattaaaaaattagtattagttggtgacatccatcaattacca
agtgtaagttatggtaatctttatgaagatgtaattgaaagtgaaaagttttcaattact
aaacttgttaaaaacaatagacaagtttcaaaagaaaataaaaattctattatagattta
tctactgcaattcgtgaagaaaaaataaatgaatttaattttgaagatacaaataatgtt
gaatttatttttaacgatgattcaaatgaattgaaaaaagaaatattaaaaatttataca
aagaataaaccatcaaatattgaagatgaaataaatgatattcaaattattgcaccaatg
tataaagaacaacttggaattcattttataaattctcaaattcaaaatgtttttaatcca
agtaatggaaaagaatttaaaagaggagaaatttattttagaccaaatgataaagtaatg
tatattgaaaatgatcctttcttagaactttctaatggggatgtgggttacatagaaaat
ttagtgatggaaaaaaataaactaaaacatgcagaaattaattttagttctagaagaaaa
gaaattacttcatctcaattttcaaaaataaatttaaattatgcatgtagtattcacaaa
acacaaggtagtgaatataaaaatgtaattttagttttagataattcgaataattattca
actttctttttaaataaaaaaatgatttatacagctgtaacaagagctaaaaataaatta
tttattttaacttctaaagatttatttttaaaaacttgcggtaaagatatgaaattaaga
agaacaacattaaaagagagaatttgtagtttgtaa
DBGET
integrated database retrieval system
