Spiroplasma chinense: SCHIN_v1c10150
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Entry
SCHIN_v1c10150 CDS
T06905
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
schi
Spiroplasma chinense
Pathway
schi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCHIN_v1c10150 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schi03400
]
SCHIN_v1c10150 (mutM)
Enzymes [BR:
schi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SCHIN_v1c10150 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCHIN_v1c10150 (mutM)
DNA repair and recombination proteins [BR:
schi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCHIN_v1c10150 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QEH62208
UniProt:
A0A5B9Y4W3
LinkDB
All DBs
Position
complement(1155602..1156429)
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AA seq
275 aa
AA seq
DB search
MPELPEVETVIRVLNEKLKNLKVTKVEMFYPKLLKSSISIEDFSQDLKGRVIEKVDRIAK
HILFILGDKVLISHLRMEGKWFVFDKDNEQDIKHTLARFELSENKVMIYSDTRKFGTLHY
QDIKEFKKLKPIVTVGPEPFDPIVNGNFLHEKIKKSTKAIKTILLDQTIISGIGNIYANE
IMFDAKISPFRAGKDISPEEAQRIVDSSVKILNRAIELGGSTIDTYQPEQGIDGKFQNEL
KVHMKNKTTCLVCGGEIKKVQLNGRGTYYCELCQK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagttgaaacagttattagggtattgaatgagaaacttaagaat
ttaaaagtaacaaaggtagaaatgttttatcctaaacttttaaagtcttcaattagtatt
gaagacttttcgcaagacttaaagggaagggttattgaaaaagtagatagaatagctaaa
catattctctttattttgggtgataaagttcttataagtcatttgagaatggaaggtaaa
tgatttgtctttgataaagacaatgaacaagatattaaacatactttagcaagatttgag
ttatcagaaaataaagtaatgatttattcagacactagaaaatttggaactcttcattat
caagatattaaagagtttaaaaaattaaaaccaatagtaactgtaggaccagaacctttt
gacccaatagttaatggtaattttttacacgaaaaaatcaaaaaatcaacaaaagctata
aaaacaatattgttagaccaaactataatttcaggaattggaaacatttatgctaatgaa
attatgtttgatgccaaaataagcccatttagagctgggaaagatatttccccagaagaa
gcacaaagaattgtagattcttcagttaagatactaaatagagctattgaactgggaggt
tcaacaatagatacttatcaacctgaacaaggtattgatggaaaatttcaaaatgaatta
aaagttcatatgaaaaataaaacaacatgtttagtttgcggtggagagatcaaaaaagtt
caactgaacggaagaggaacttactactgtgaattgtgtcaaaaataa
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